RNA–Protein interactions for RNA: ENST00000552296.6

PCBP2-222, Transcript of poly(rC) binding protein 2, human

APPRIS ALT1 TSL 5 BASIC

Gene PCBP2, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP2-222	ENST00000552296	RAB3GAP2	Q9H2M9	1393 aa		13.24	□□□□□ -0.29
PCBP2-222	ENST00000552296	ATP7B	P35670	1465 aa		13.23	□□□□□ -0.29
PCBP2-222	ENST00000552296	KRT27	Q7Z3Y8	459 aa		13.23	□□□□□ -0.29
PCBP2-222	ENST00000552296	RNF216	Q9NWF9	866 aa	Predicted RBP	13.22	□□□□□ -0.29
PCBP2-222	ENST00000552296	CACNB1	Q02641	598 aa	Predicted RBP	13.21	□□□□□ -0.29
PCBP2-222	ENST00000552296	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.21	□□□□□ -0.29
PCBP2-222	ENST00000552296	TRAK1	Q9UPV9	953 aa		13.21	□□□□□ -0.29
PCBP2-222	ENST00000552296	KIAA1210	Q9ULL0	1709 aa		13.21	□□□□□ -0.3
PCBP2-222	ENST00000552296	WASL	O00401	505 aa	Predicted RBP	13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	HAP1	P54257	671 aa	Predicted RBP	13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	BTG4	Q9NY30	223 aa		13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	POGK	Q9P215	609 aa		13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	DISP2	A7MBM2	1401 aa		13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	EIF3A	Q14152	1382 aa	Known RBP	13.2	□□□□□ -0.3
PCBP2-222	ENST00000552296	SPATA31A5	Q5VU36	1347 aa		13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	SPATA31A7	Q8IWB4	1347 aa		13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	PLEKHG5	O94827	1062 aa		13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	FAM98C	Q17RN3	349 aa	Known RBP	13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	LMOD2	Q6P5Q4	547 aa		13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	GPRASP1	Q5JY77	1395 aa		13.19	□□□□□ -0.3
PCBP2-222	ENST00000552296	LMO7	Q8WWI1	1683 aa		13.18	□□□□□ -0.3
PCBP2-222	ENST00000552296	RREB1	Q92766	1687 aa		13.18	□□□□□ -0.3
PCBP2-222	ENST00000552296	CCDC9	Q9Y3X0	531 aa	Known RBP	13.17	□□□□□ -0.3
PCBP2-222	ENST00000552296	NRK	Q7Z2Y5	1582 aa		13.17	□□□□□ -0.3
PCBP2-222	ENST00000552296	SF3B2	Q13435	895 aa	Known RBP	13.16	□□□□□ -0.3
PCBP2-222	ENST00000552296	POLR3A	O14802	1390 aa	Predicted RBP	13.16	□□□□□ -0.3
PCBP2-222	ENST00000552296	HRC	P23327	699 aa		13.15	□□□□□ -0.3
PCBP2-222	ENST00000552296	FAM182B	Q5T319	152 aa		13.15	□□□□□ -0.3
PCBP2-222	ENST00000552296	DCAF11	Q8TEB1	546 aa		13.15	□□□□□ -0.3
PCBP2-222	ENST00000552296	STAC3	Q96MF2	364 aa		13.15	□□□□□ -0.3
PCBP2-222	ENST00000552296	NUP188	Q5SRE5	1749 aa		13.15	□□□□□ -0.3
PCBP2-222	ENST00000552296	BAG6	P46379	1132 aa		13.14	□□□□□ -0.31
PCBP2-222	ENST00000552296	KIAA0232	Q92628	1395 aa		13.14	□□□□□ -0.31
PCBP2-222	ENST00000552296	SPATA31A1	Q5TZJ5	1347 aa		13.14	□□□□□ -0.31
PCBP2-222	ENST00000552296	EN1	Q05925	392 aa	Predicted RBP	13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	KDM2A	Q9Y2K7	1162 aa		13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	CAMTA1	Q9Y6Y1	1673 aa		13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	PARP4	Q9UKK3	1724 aa	Known RBP	13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	PSD	A5PKW4	1024 aa	Predicted RBP	13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	NUDT16	Q96DE0	195 aa	Known RBP	13.13	□□□□□ -0.31
PCBP2-222	ENST00000552296	SBF2	Q86WG5	1849 aa		13.12	□□□□□ -0.31
PCBP2-222	ENST00000552296	NGDN	Q8NEJ9	315 aa	Known RBP	13.12	□□□□□ -0.31
PCBP2-222	ENST00000552296	PRDM11	Q9NQV5	511 aa		13.12	□□□□□ -0.31
PCBP2-222	ENST00000552296	PEAK1	Q9H792	1746 aa		13.12	□□□□□ -0.31
PCBP2-222	ENST00000552296	CAMKK2	Q96RR4	588 aa		13.11	□□□□□ -0.31
PCBP2-222	ENST00000552296	SSH2	Q76I76	1423 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	WNK3	Q9BYP7	1800 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	COL18A1	P39060	1754 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296		A0A0G2JS52	829 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	PAK3	O75914	559 aa	Predicted RBP	13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	MYT1	Q01538	1121 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	CHRNA2	Q15822	529 aa		13.1	□□□□□ -0.31
PCBP2-222	ENST00000552296	USP19	O94966	1318 aa		13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	CPD	O75976	1380 aa		13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	QRICH2	Q9H0J4	1663 aa		13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	PLEKHG3	A1L390	1219 aa		13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	EZH2	Q15910	746 aa	Known RBP	13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	CDK19	Q9BWU1	502 aa		13.09	□□□□□ -0.31
PCBP2-222	ENST00000552296	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.08	□□□□□ -0.31
PCBP2-222	ENST00000552296	RGPD4	Q7Z3J3	1758 aa		13.08	□□□□□ -0.31
PCBP2-222	ENST00000552296	ACE	P12821	1306 aa		13.08	□□□□□ -0.31
PCBP2-222	ENST00000552296	NBPF8	Q3BBV2	869 aa		13.08	□□□□□ -0.32
PCBP2-222	ENST00000552296	NCBP3	Q53F19	620 aa	Known RBP	13.08	□□□□□ -0.32
PCBP2-222	ENST00000552296	BARGIN	Q6ZT62	677 aa		13.08	□□□□□ -0.32
PCBP2-222	ENST00000552296	ZC3H6	P61129	1189 aa	Known RBP	13.07	□□□□□ -0.32
PCBP2-222	ENST00000552296	R3HDM1	Q15032	1099 aa	Known RBP	13.07	□□□□□ -0.32
PCBP2-222	ENST00000552296	CCDC61	Q9Y6R9	512 aa		13.07	□□□□□ -0.32
PCBP2-222	ENST00000552296	PARD3	Q8TEW0	1356 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	LRRC37A3	O60309	1634 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	PIK3C2A	O00443	1686 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	COL5A2	P05997	1499 aa	Predicted RBP	13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	NUTM2G	Q5VZR2	741 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	FAM196A	Q6ZSG2	479 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	SLIT3	O75094	1523 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	RGPD5	Q99666	1765 aa		13.06	□□□□□ -0.32
PCBP2-222	ENST00000552296	TRIM37	O94972	964 aa		13.05	□□□□□ -0.32
PCBP2-222	ENST00000552296	NBPF1	Q3BBV0	1214 aa		13.05	□□□□□ -0.32
PCBP2-222	ENST00000552296	STRN4	Q9NRL3	753 aa		13.05	□□□□□ -0.32
PCBP2-222	ENST00000552296	AKAP12	Q02952	1782 aa		13.04	□□□□□ -0.32
PCBP2-222	ENST00000552296	LARP1	Q6PKG0	1096 aa	Known RBP	13.04	□□□□□ -0.32
PCBP2-222	ENST00000552296	PPIP5K1	Q6PFW1	1433 aa		13.04	□□□□□ -0.32
PCBP2-222	ENST00000552296	CASZ1	Q86V15	1759 aa		13.02	□□□□□ -0.32
PCBP2-222	ENST00000552296	RNF39	Q9H2S5	420 aa		13.02	□□□□□ -0.33
PCBP2-222	ENST00000552296	BRD4	O60885	1362 aa	Predicted RBP	13.02	□□□□□ -0.33
PCBP2-222	ENST00000552296	TRPM1	Q7Z4N2	1603 aa		13.02	□□□□□ -0.33
PCBP2-222	ENST00000552296	GC	P02774	474 aa		13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	TCP11L2	Q8N4U5	519 aa		13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	ABTB2	Q8N961	1025 aa		13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	USP35	Q9P2H5	1018 aa		13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	THRAP3	Q9Y2W1	955 aa	Known RBP	13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	USP6	P35125	1406 aa		13.01	□□□□□ -0.33
PCBP2-222	ENST00000552296	CRB1	P82279	1406 aa		13	□□□□□ -0.33
PCBP2-222	ENST00000552296	APBA3	O96018	575 aa		13	□□□□□ -0.33
PCBP2-222	ENST00000552296	UTRN	P46939	3433 aa		12.99	□□□□□ -0.33
PCBP2-222	ENST00000552296	AATK	Q6ZMQ8	1374 aa		12.98	□□□□□ -0.33
PCBP2-222	ENST00000552296	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.98	□□□□□ -0.33
PCBP2-222	ENST00000552296	NLRP13	Q86W25	1043 aa		12.98	□□□□□ -0.33
PCBP2-222	ENST00000552296	USP54	Q70EL1	1684 aa		12.98	□□□□□ -0.33
PCBP2-222	ENST00000552296	EVA1C	P58658	441 aa		12.97	□□□□□ -0.33

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