RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
CDK4-211ENST00000552254 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
CDK4-211ENST00000552254 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
CDK4-211ENST00000552254 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
CDK4-211ENST00000552254 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
CDK4-211ENST00000552254 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
CDK4-211ENST00000552254 CHD4Q14839 1912 aa13.05□□□□□ -0.32
CDK4-211ENST00000552254 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
CDK4-211ENST00000552254 R3HDM1Q15032 1099 aaKnown RBP13.04□□□□□ -0.32
CDK4-211ENST00000552254 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
CDK4-211ENST00000552254 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
CDK4-211ENST00000552254 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
CDK4-211ENST00000552254 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
CDK4-211ENST00000552254 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
CDK4-211ENST00000552254 SLIT2O94813 1529 aa13.03□□□□□ -0.32
CDK4-211ENST00000552254 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
CDK4-211ENST00000552254 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
CDK4-211ENST00000552254 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
CDK4-211ENST00000552254 PSME1Q06323 249 aa13.01□□□□□ -0.33
CDK4-211ENST00000552254 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
CDK4-211ENST00000552254 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
CDK4-211ENST00000552254 NWD2Q9ULI1 1742 aa13.01□□□□□ -0.33
CDK4-211ENST00000552254 ABCA3Q99758 1704 aa13□□□□□ -0.33
CDK4-211ENST00000552254 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
CDK4-211ENST00000552254 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
CDK4-211ENST00000552254 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
CDK4-211ENST00000552254 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
CDK4-211ENST00000552254 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
CDK4-211ENST00000552254 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
CDK4-211ENST00000552254 VPS72Q15906 364 aa12.99□□□□□ -0.33
CDK4-211ENST00000552254 EIF3AQ14152 1382 aaKnown RBP12.98□□□□□ -0.33
CDK4-211ENST00000552254 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
CDK4-211ENST00000552254 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
CDK4-211ENST00000552254 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
CDK4-211ENST00000552254 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
CDK4-211ENST00000552254 ALS2Q96Q42 1657 aa12.96□□□□□ -0.33
CDK4-211ENST00000552254 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
CDK4-211ENST00000552254 NGDNQ8NEJ9 315 aaKnown RBP12.95□□□□□ -0.34
CDK4-211ENST00000552254 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
CDK4-211ENST00000552254 ATP7BP35670 1465 aa12.95□□□□□ -0.34
CDK4-211ENST00000552254 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
CDK4-211ENST00000552254 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
CDK4-211ENST00000552254 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CDK4-211ENST00000552254 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
CDK4-211ENST00000552254 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
CDK4-211ENST00000552254 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
CDK4-211ENST00000552254 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
CDK4-211ENST00000552254 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
CDK4-211ENST00000552254 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
CDK4-211ENST00000552254 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
CDK4-211ENST00000552254 NRAPQ86VF7 1730 aa12.91□□□□□ -0.34
CDK4-211ENST00000552254 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
CDK4-211ENST00000552254 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
CDK4-211ENST00000552254 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
CDK4-211ENST00000552254 USP47Q96K76 1375 aa12.91□□□□□ -0.34
CDK4-211ENST00000552254 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
CDK4-211ENST00000552254 NUTM2GQ5VZR2 741 aa12.9□□□□□ -0.34
CDK4-211ENST00000552254 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
CDK4-211ENST00000552254 TESK2Q96S53 571 aa12.89□□□□□ -0.35
CDK4-211ENST00000552254 ACEP12821 1306 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
CDK4-211ENST00000552254 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 BTG4Q9NY30 223 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
CDK4-211ENST00000552254 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
CDK4-211ENST00000552254 AKAP12Q02952 1782 aa12.87□□□□□ -0.35
CDK4-211ENST00000552254 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
CDK4-211ENST00000552254 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
CDK4-211ENST00000552254 TRIM37O94972 964 aa12.86□□□□□ -0.35
CDK4-211ENST00000552254 APBA3O96018 575 aa12.86□□□□□ -0.35
CDK4-211ENST00000552254 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CDK4-211ENST00000552254 RREB1Q92766 1687 aa12.86□□□□□ -0.35
CDK4-211ENST00000552254 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
CDK4-211ENST00000552254 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
CDK4-211ENST00000552254 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
CDK4-211ENST00000552254 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
CDK4-211ENST00000552254 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
CDK4-211ENST00000552254 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
CDK4-211ENST00000552254 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
CDK4-211ENST00000552254 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
CDK4-211ENST00000552254 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
CDK4-211ENST00000552254 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK4-211ENST00000552254 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
CDK4-211ENST00000552254 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
CDK4-211ENST00000552254 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
CDK4-211ENST00000552254 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
CDK4-211ENST00000552254 TMF1P82094 1093 aa12.82□□□□□ -0.36
CDK4-211ENST00000552254 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
CDK4-211ENST00000552254 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
CDK4-211ENST00000552254 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
CDK4-211ENST00000552254 KCNQ2O43526 872 aa12.81□□□□□ -0.36
CDK4-211ENST00000552254 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
CDK4-211ENST00000552254 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
CDK4-211ENST00000552254 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
CDK4-211ENST00000552254 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
CDK4-211ENST00000552254 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
CDK4-211ENST00000552254 USP6P35125 1406 aa12.79□□□□□ -0.36
CDK4-211ENST00000552254 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms