RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
SMARCC2-207ENST00000549757 UHRF1BP1LA0JNW5 1464 aa8.69□□□□□ -1.02
SMARCC2-207ENST00000549757 HLA-CQ95604 372 aa8.68□□□□□ -1.02
SMARCC2-207ENST00000549757 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
SMARCC2-207ENST00000549757 PPRC1Q5VV67 1664 aaKnown RBP8.68□□□□□ -1.02
SMARCC2-207ENST00000549757 ADH1BP00325 375 aa8.67□□□□□ -1.02
SMARCC2-207ENST00000549757 ZCCHC11Q5TAX3 1644 aaKnown RBP8.67□□□□□ -1.02
SMARCC2-207ENST00000549757 TEX14Q8IWB6 1497 aa8.67□□□□□ -1.02
SMARCC2-207ENST00000549757 DISP1Q96F81 1524 aa8.67□□□□□ -1.02
SMARCC2-207ENST00000549757 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
SMARCC2-207ENST00000549757 KIAA0556O60303 1618 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 EPRSP07814 1512 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 RAPGEF2Q9Y4G8 1499 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 RGS20O76081 388 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 BEGAINQ9BUH8 593 aa8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-207ENST00000549757 MAP3K4Q9Y6R4 1608 aa8.65□□□□□ -1.02
SMARCC2-207ENST00000549757 UGGT2Q9NYU1 1516 aa8.65□□□□□ -1.02
SMARCC2-207ENST00000549757 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
SMARCC2-207ENST00000549757 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
SMARCC2-207ENST00000549757 SPSB2Q99619 263 aa8.65□□□□□ -1.02
SMARCC2-207ENST00000549757 KDM5BQ9UGL1 1544 aa8.64□□□□□ -1.03
SMARCC2-207ENST00000549757 LOC105371045A0A1W2PR82 267 aa8.64□□□□□ -1.03
SMARCC2-207ENST00000549757 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
SMARCC2-207ENST00000549757 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
SMARCC2-207ENST00000549757 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
SMARCC2-207ENST00000549757 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-207ENST00000549757 S1PR4O95977 384 aa8.63□□□□□ -1.03
SMARCC2-207ENST00000549757 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-207ENST00000549757 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
SMARCC2-207ENST00000549757 WDR7Q9Y4E6 1490 aa8.63□□□□□ -1.03
SMARCC2-207ENST00000549757 CTTNBP2Q8WZ74 1663 aa8.62□□□□□ -1.03
SMARCC2-207ENST00000549757 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
SMARCC2-207ENST00000549757 ARID3AQ99856 593 aa8.62□□□□□ -1.03
SMARCC2-207ENST00000549757 SLC6A16Q9GZN6 736 aa8.62□□□□□ -1.03
SMARCC2-207ENST00000549757 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
SMARCC2-207ENST00000549757 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
SMARCC2-207ENST00000549757 PCDHGC3Q9UN70 934 aa8.61□□□□□ -1.03
SMARCC2-207ENST00000549757 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
SMARCC2-207ENST00000549757 GOLGA3Q08378 1498 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 NDUFV2P19404 249 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 GGCXP38435 758 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 Q3C1V9 767 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 FAM9AQ8IZU1 332 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 GPBP1L1Q9HC44 474 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 HECW2Q9P2P5 1572 aa8.6□□□□□ -1.03
SMARCC2-207ENST00000549757 CFAP43Q8NDM7 1665 aa8.59□□□□□ -1.03
SMARCC2-207ENST00000549757 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
SMARCC2-207ENST00000549757 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
SMARCC2-207ENST00000549757 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
SMARCC2-207ENST00000549757 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
SMARCC2-207ENST00000549757 CD109Q6YHK3 1445 aa8.58□□□□□ -1.04
SMARCC2-207ENST00000549757 FDX1P10109 184 aa8.58□□□□□ -1.04
SMARCC2-207ENST00000549757 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
SMARCC2-207ENST00000549757 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
SMARCC2-207ENST00000549757 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 GJA5P36382 358 aa8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 MAGI3Q5TCQ9 1506 aa8.57□□□□□ -1.04
SMARCC2-207ENST00000549757 ABCA8O94911 1581 aa8.56□□□□□ -1.04
SMARCC2-207ENST00000549757 ARID3CA6NKF2 412 aa8.56□□□□□ -1.04
SMARCC2-207ENST00000549757 MMP16P51512 607 aa8.56□□□□□ -1.04
SMARCC2-207ENST00000549757 KIF21BO75037 1637 aa8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 SPTLC1O15269 473 aa8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-207ENST00000549757 RETREG3Q86VR2 466 aa8.54□□□□□ -1.04
SMARCC2-207ENST00000549757 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
SMARCC2-207ENST00000549757 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
SMARCC2-207ENST00000549757 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
SMARCC2-207ENST00000549757 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
SMARCC2-207ENST00000549757 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
SMARCC2-207ENST00000549757 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
SMARCC2-207ENST00000549757 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
SMARCC2-207ENST00000549757 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-207ENST00000549757 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
SMARCC2-207ENST00000549757 PRXQ9BXM0 1461 aa8.51□□□□□ -1.05
SMARCC2-207ENST00000549757 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
SMARCC2-207ENST00000549757 MTMR2Q13614 643 aa8.5□□□□□ -1.05
SMARCC2-207ENST00000549757 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
SMARCC2-207ENST00000549757 JUNDP17535 347 aa8.49□□□□□ -1.05
SMARCC2-207ENST00000549757 SLC19A1P41440 591 aa8.49□□□□□ -1.05
SMARCC2-207ENST00000549757 ATP10BO94823 1461 aa8.49□□□□□ -1.05
SMARCC2-207ENST00000549757 ARID4BQ4LE39 1312 aaPredicted RBP8.49□□□□□ -1.05
SMARCC2-207ENST00000549757 ARAP3Q8WWN8 1544 aa8.49□□□□□ -1.05
SMARCC2-207ENST00000549757 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 RAPGEF6Q8TEU7 1601 aa8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 EIF5BO60841 1220 aaKnown RBP8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 IGSF3O75054 1194 aa8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
SMARCC2-207ENST00000549757 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms