RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
SMARCD1-207ENST00000549526 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
SMARCD1-207ENST00000549526 PRAG1Q86YV5 1406 aa12.84□□□□□ -0.35
SMARCD1-207ENST00000549526 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
SMARCD1-207ENST00000549526 STK26Q9P289 416 aa12.83□□□□□ -0.36
SMARCD1-207ENST00000549526 NUP155O75694 1391 aa12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
SMARCD1-207ENST00000549526 ARXQ96QS3 562 aa12.81□□□□□ -0.36
SMARCD1-207ENST00000549526 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
SMARCD1-207ENST00000549526 KIF1BO60333 1816 aa12.81□□□□□ -0.36
SMARCD1-207ENST00000549526 PLSCR1O15162 318 aa12.8□□□□□ -0.36
SMARCD1-207ENST00000549526 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
SMARCD1-207ENST00000549526 MTFR1LQ9H019 292 aa12.8□□□□□ -0.36
SMARCD1-207ENST00000549526 EVA1CP58658 441 aa12.78□□□□□ -0.36
SMARCD1-207ENST00000549526 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
SMARCD1-207ENST00000549526 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 SLC34A2O95436 690 aa12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 PRELPP51888 382 aa12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.37
SMARCD1-207ENST00000549526 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 TECPR2O15040 1411 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
SMARCD1-207ENST00000549526 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
SMARCD1-207ENST00000549526 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
SMARCD1-207ENST00000549526 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
SMARCD1-207ENST00000549526 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
SMARCD1-207ENST00000549526 PROM2Q8N271 834 aa12.74□□□□□ -0.37
SMARCD1-207ENST00000549526 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
SMARCD1-207ENST00000549526 MAP3K5Q99683 1374 aa12.73□□□□□ -0.37
SMARCD1-207ENST00000549526 APLP2Q06481 763 aa12.73□□□□□ -0.37
SMARCD1-207ENST00000549526 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
SMARCD1-207ENST00000549526 ATP10DQ9P241 1426 aa12.72□□□□□ -0.37
SMARCD1-207ENST00000549526 SBF2Q86WG5 1849 aa12.72□□□□□ -0.37
SMARCD1-207ENST00000549526 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
SMARCD1-207ENST00000549526 ZNF526Q8TF50 670 aaPredicted RBP12.72□□□□□ -0.37
SMARCD1-207ENST00000549526 KIAA0232Q92628 1395 aa12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
SMARCD1-207ENST00000549526 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 APLP1P51693 650 aa12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 LARP1Q6PKG0 1096 aaKnown RBP12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 TRPM3Q9HCF6 1732 aaPredicted RBP12.7□□□□□ -0.38
SMARCD1-207ENST00000549526 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 OVOS2A0A0G2JMS6 1433 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 PPLO60437 1756 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
SMARCD1-207ENST00000549526 THRAP3Q9Y2W1 955 aaKnown RBP12.68□□□□□ -0.38
SMARCD1-207ENST00000549526 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
SMARCD1-207ENST00000549526 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
SMARCD1-207ENST00000549526 SSH2Q76I76 1423 aa12.67□□□□□ -0.38
SMARCD1-207ENST00000549526 PARP4Q9UKK3 1724 aaKnown RBP12.66□□□□□ -0.38
SMARCD1-207ENST00000549526 KNDC1Q76NI1 1749 aa12.65□□□□□ -0.38
SMARCD1-207ENST00000549526 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
SMARCD1-207ENST00000549526 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.384e-12■■■□□ 16
SMARCD1-207ENST00000549526 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCD1-207ENST00000549526 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
SMARCD1-207ENST00000549526 ACIN1Q9UKV3 1341 aaKnown RBP12.64□□□□□ -0.39
SMARCD1-207ENST00000549526 POLD1P28340 1107 aa12.64□□□□□ -0.39
SMARCD1-207ENST00000549526 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
SMARCD1-207ENST00000549526 DDB1Q16531 1140 aa12.63□□□□□ -0.39
SMARCD1-207ENST00000549526 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
SMARCD1-207ENST00000549526 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
SMARCD1-207ENST00000549526 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
SMARCD1-207ENST00000549526 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
SMARCD1-207ENST00000549526 NUTM2GQ5VZR2 741 aa12.62□□□□□ -0.39
SMARCD1-207ENST00000549526 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
SMARCD1-207ENST00000549526 ATP7BP35670 1465 aa12.6□□□□□ -0.39
SMARCD1-207ENST00000549526 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
SMARCD1-207ENST00000549526 PCNTO95613 3336 aa12.6□□□□□ -0.39
SMARCD1-207ENST00000549526 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
SMARCD1-207ENST00000549526 KIF3CO14782 793 aa12.59□□□□□ -0.39
SMARCD1-207ENST00000549526 ITGAEP38570 1179 aa12.59□□□□□ -0.39
SMARCD1-207ENST00000549526 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
SMARCD1-207ENST00000549526 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
SMARCD1-207ENST00000549526 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
SMARCD1-207ENST00000549526 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
SMARCD1-207ENST00000549526 POGKQ9P215 609 aa12.58□□□□□ -0.4
SMARCD1-207ENST00000549526 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
SMARCD1-207ENST00000549526 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
SMARCD1-207ENST00000549526 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms