RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 RALBP1Q15311 655 aa16.66■□□□□ 0.26
ERBB3-208ENST00000549205 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
ERBB3-208ENST00000549205 TTC21BQ7Z4L5 1316 aa16.66■□□□□ 0.26
ERBB3-208ENST00000549205 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
ERBB3-208ENST00000549205 FYB1O15117 783 aa16.65■□□□□ 0.26
ERBB3-208ENST00000549205 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
ERBB3-208ENST00000549205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERBB3-208ENST00000549205 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
ERBB3-208ENST00000549205 FOXO3O43524 673 aa16.64■□□□□ 0.25
ERBB3-208ENST00000549205 PSME1Q06323 249 aa16.64■□□□□ 0.25
ERBB3-208ENST00000549205 ROBO1Q9Y6N7 1651 aa16.64■□□□□ 0.25
ERBB3-208ENST00000549205 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.25
ERBB3-208ENST00000549205 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
ERBB3-208ENST00000549205 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
ERBB3-208ENST00000549205 NME9Q86XW9 330 aa16.62■□□□□ 0.25
ERBB3-208ENST00000549205 GGNBP2Q9H3C7 697 aa16.62■□□□□ 0.25
ERBB3-208ENST00000549205 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
ERBB3-208ENST00000549205 PXDNQ92626 1479 aa16.61■□□□□ 0.25
ERBB3-208ENST00000549205 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
ERBB3-208ENST00000549205 MORC1Q86VD1 984 aa16.61■□□□□ 0.25
ERBB3-208ENST00000549205 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
ERBB3-208ENST00000549205 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
ERBB3-208ENST00000549205 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
ERBB3-208ENST00000549205 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
ERBB3-208ENST00000549205 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
ERBB3-208ENST00000549205 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
ERBB3-208ENST00000549205 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
ERBB3-208ENST00000549205 TOM1O60784 492 aa16.58■□□□□ 0.24
ERBB3-208ENST00000549205 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
ERBB3-208ENST00000549205 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
ERBB3-208ENST00000549205 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
ERBB3-208ENST00000549205 SBNO1A3KN83 1393 aa16.58■□□□□ 0.24
ERBB3-208ENST00000549205 AHDC1Q5TGY3 1603 aaPredicted RBP16.58■□□□□ 0.24
ERBB3-208ENST00000549205 COG3Q96JB2 828 aa16.57■□□□□ 0.24
ERBB3-208ENST00000549205 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
ERBB3-208ENST00000549205 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
ERBB3-208ENST00000549205 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
ERBB3-208ENST00000549205 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
ERBB3-208ENST00000549205 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
ERBB3-208ENST00000549205 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
ERBB3-208ENST00000549205 PHLPP1O60346 1717 aa16.55■□□□□ 0.24
ERBB3-208ENST00000549205 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
ERBB3-208ENST00000549205 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
ERBB3-208ENST00000549205 NLRP6P59044 892 aa16.54■□□□□ 0.24
ERBB3-208ENST00000549205 CRYBG1Q9Y4K1 1723 aa16.53■□□□□ 0.24
ERBB3-208ENST00000549205 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
ERBB3-208ENST00000549205 SPATA31A3Q5VYP0 1347 aa16.52■□□□□ 0.24
ERBB3-208ENST00000549205 LTN1O94822 1766 aa16.52■□□□□ 0.24
ERBB3-208ENST00000549205 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.23
ERBB3-208ENST00000549205 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
ERBB3-208ENST00000549205 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
ERBB3-208ENST00000549205 SLIT3O75094 1523 aa16.51■□□□□ 0.23
ERBB3-208ENST00000549205 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
ERBB3-208ENST00000549205 USP19O94966 1318 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 COL16A1Q07092 1604 aaPredicted RBP16.5■□□□□ 0.23
ERBB3-208ENST00000549205 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 MRS2Q9HD23 443 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 ABCA3Q99758 1704 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 NFAT5O94916 1531 aa16.5■□□□□ 0.23
ERBB3-208ENST00000549205 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
ERBB3-208ENST00000549205 PEAK1Q9H792 1746 aa16.48■□□□□ 0.23
ERBB3-208ENST00000549205 MTHFSP49914 203 aa16.47■□□□□ 0.23
ERBB3-208ENST00000549205 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
ERBB3-208ENST00000549205 FBLN1P23142 703 aa16.46■□□□□ 0.23
ERBB3-208ENST00000549205 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
ERBB3-208ENST00000549205 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
ERBB3-208ENST00000549205 SHPRHQ149N8 1683 aa16.46■□□□□ 0.23
ERBB3-208ENST00000549205 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
ERBB3-208ENST00000549205 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
ERBB3-208ENST00000549205 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
ERBB3-208ENST00000549205 SOX12O15370 315 aa16.44■□□□□ 0.22
ERBB3-208ENST00000549205 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
ERBB3-208ENST00000549205 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
ERBB3-208ENST00000549205 INSRP06213 1382 aa16.43■□□□□ 0.22
ERBB3-208ENST00000549205 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
ERBB3-208ENST00000549205 GCP02774 474 aa16.43■□□□□ 0.22
ERBB3-208ENST00000549205 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
ERBB3-208ENST00000549205 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
ERBB3-208ENST00000549205 RGPD5Q99666 1765 aa16.42■□□□□ 0.22
ERBB3-208ENST00000549205 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
ERBB3-208ENST00000549205 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
ERBB3-208ENST00000549205 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
ERBB3-208ENST00000549205 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
ERBB3-208ENST00000549205 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
ERBB3-208ENST00000549205 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
ERBB3-208ENST00000549205 COL18A1P39060 1754 aa16.4■□□□□ 0.22
ERBB3-208ENST00000549205 FLT4P35916 1363 aa16.39■□□□□ 0.21
ERBB3-208ENST00000549205 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
ERBB3-208ENST00000549205 ABCC6O95255 1503 aa16.38■□□□□ 0.21
ERBB3-208ENST00000549205 AMPHP49418 695 aa16.37■□□□□ 0.21
ERBB3-208ENST00000549205 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
ERBB3-208ENST00000549205 CPDO75976 1380 aa16.37■□□□□ 0.21
ERBB3-208ENST00000549205 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
ERBB3-208ENST00000549205 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
ERBB3-208ENST00000549205 HOXC9P31274 260 aa16.36■□□□□ 0.21
ERBB3-208ENST00000549205 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
ERBB3-208ENST00000549205 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
ERBB3-208ENST00000549205 IP6K1Q92551 441 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms