RNA–Protein interactions for RNA: ENST00000548858.1

AC025260.1-201, humanhuman

BASIC

Gene AC025260.1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025260.1-201ENST00000548858 USP17L4A6NCW7 530 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 PTPRNQ16849 979 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 USP17L2Q6R6M4 530 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 USP17L1Q7RTZ2 530 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 ZNF687Q8N1G0 1237 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 ZMIZ1Q9ULJ6 1067 aa8.01□□□□□ -1.13
AC025260.1-201ENST00000548858 FAM196BA6NMK8 535 aa8□□□□□ -1.13
AC025260.1-201ENST00000548858 PIK3CDO00329 1044 aa8□□□□□ -1.13
AC025260.1-201ENST00000548858 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
AC025260.1-201ENST00000548858 MRPL50Q8N5N7 158 aaKnown RBP8□□□□□ -1.13
AC025260.1-201ENST00000548858 CDKN2AIPQ9NXV6 580 aaPredicted RBP8□□□□□ -1.13
AC025260.1-201ENST00000548858 GPSM3Q9Y4H4 160 aa8□□□□□ -1.13
AC025260.1-201ENST00000548858 USP17L5A8MUK1 530 aa7.99□□□□□ -1.13
AC025260.1-201ENST00000548858 JUNDP17535 347 aa7.99□□□□□ -1.13
AC025260.1-201ENST00000548858 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
AC025260.1-201ENST00000548858 NOVA2Q9UNW9 492 aaKnown RBP7.99□□□□□ -1.13
AC025260.1-201ENST00000548858 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 SKIP12755 728 aa7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 CCER1Q8TC90 406 aaPredicted RBP7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 GPKOWQ92917 476 aaPredicted RBP eCLIP7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
AC025260.1-201ENST00000548858 LZTS3O60299 673 aaPredicted RBP7.97□□□□□ -1.13
AC025260.1-201ENST00000548858 TXNDC2Q86VQ3 553 aa7.97□□□□□ -1.13
AC025260.1-201ENST00000548858 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
AC025260.1-201ENST00000548858 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
AC025260.1-201ENST00000548858 USP17L15C9J2P7 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L13C9JLJ4 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L11C9JVI0 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L21D6R901 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L18D6R9N7 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L22D6RA61 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L17D6RBQ6 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L19D6RCP7 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L20D6RJB6 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 E9PSI1 815 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 NR1I2O75469 434 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 USP17L24Q0WX57 530 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
AC025260.1-201ENST00000548858 ATP5J2-PTCD1G3V325 749 aa7.95□□□□□ -1.14
AC025260.1-201ENST00000548858 PTK2Q05397 1052 aa7.95□□□□□ -1.14
AC025260.1-201ENST00000548858 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
AC025260.1-201ENST00000548858 PDXDC2PQ6P474 469 aa7.95□□□□□ -1.14
AC025260.1-201ENST00000548858 CEP126Q9P2H0 1117 aa7.95□□□□□ -1.14
AC025260.1-201ENST00000548858 CCNYL3P0C7X3 344 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 EMP3P54852 163 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 PTK7Q13308 1070 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 MSS51Q4VC12 460 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 PHLDB3Q6NSJ2 640 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 LARP1Q6PKG0 1096 aaKnown RBP7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 ANKK1Q8NFD2 765 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 MKRN1Q9UHC7 482 aaKnown RBP7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
AC025260.1-201ENST00000548858 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 SSFA2P28290 1259 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 CTHP32929 405 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 APLP1P51693 650 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 PPP4CP60510 307 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 NBPF14Q5TI25 921 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 OTUD5Q96G74 571 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 CHIC2Q9UKJ5 165 aa7.93□□□□□ -1.14
AC025260.1-201ENST00000548858 HRO43593 1189 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 DXOO77932 396 aaKnown RBP7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 ARID4AP29374 1257 aaPredicted RBP7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 NCOA4Q13772 614 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 MAP7D1Q3KQU3 841 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 ADGRD1Q6QNK2 874 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 RNF135Q8IUD6 432 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 DEPDC4Q8N2C3 294 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 PLPP7Q8NBV4 271 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
AC025260.1-201ENST00000548858 RASA1P20936 1047 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
AC025260.1-201ENST00000548858 ERCC3P19447 782 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 MMP16P51512 607 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 EML3Q32P44 896 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 ANKMY2Q8IV38 441 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 PCDHB9Q9Y5E1 797 aa7.9□□□□□ -1.14
AC025260.1-201ENST00000548858 ST18O60284 1047 aa7.89□□□□□ -1.15
AC025260.1-201ENST00000548858 LSM11P83369 360 aaKnown RBP eCLIP7.89□□□□□ -1.15
AC025260.1-201ENST00000548858 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
AC025260.1-201ENST00000548858 GOLGA8CPA6NN73 597 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms