RNA–Protein interactions for RNA: ENST00000548477.5

SLC8B1-204, Transcript of solute carrier family 8 member B1, humanhuman

TSL 2

Gene SLC8B1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-204ENST00000548477 TECPR2O15040 1411 aa23.49■■□□□ 1.35
SLC8B1-204ENST00000548477 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
SLC8B1-204ENST00000548477 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
SLC8B1-204ENST00000548477 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
SLC8B1-204ENST00000548477 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
SLC8B1-204ENST00000548477 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
SLC8B1-204ENST00000548477 ERICH6Q7L0X2 663 aa23.47■■□□□ 1.35
SLC8B1-204ENST00000548477 MS4A1P11836 297 aa23.46■■□□□ 1.35
SLC8B1-204ENST00000548477 DIP2AQ14689 1571 aa23.45■■□□□ 1.35
SLC8B1-204ENST00000548477 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 CENPQQ7L2Z9 268 aaPredicted RBP23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 MYH16Q9H6N6 1097 aa23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 WASLO00401 505 aaPredicted RBP23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 CANXP27824 592 aaKnown RBP23.44■■□□□ 1.34
SLC8B1-204ENST00000548477 MAPK8IP3Q9UPT6 1336 aa23.43■■□□□ 1.34
SLC8B1-204ENST00000548477 MSH5O43196 834 aa23.43■■□□□ 1.34
SLC8B1-204ENST00000548477 BCAR3O75815 825 aa23.43■■□□□ 1.34
SLC8B1-204ENST00000548477 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
SLC8B1-204ENST00000548477 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
SLC8B1-204ENST00000548477 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
SLC8B1-204ENST00000548477 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
SLC8B1-204ENST00000548477 PDE3AQ14432 1141 aa23.4■■□□□ 1.34
SLC8B1-204ENST00000548477 DIAPH1O60610 1272 aaKnown RBP23.4■■□□□ 1.34
SLC8B1-204ENST00000548477 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
SLC8B1-204ENST00000548477 KDM2BQ8NHM5 1336 aa23.4■■□□□ 1.34
SLC8B1-204ENST00000548477 ITSN1Q15811 1721 aa23.39■■□□□ 1.34
SLC8B1-204ENST00000548477 PNPLA6Q8IY17 1366 aa23.39■■□□□ 1.33
SLC8B1-204ENST00000548477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.39■■□□□ 1.33
SLC8B1-204ENST00000548477 CPSF1Q10570 1443 aaKnown RBP23.38■■□□□ 1.33
SLC8B1-204ENST00000548477 MON2Q7Z3U7 1717 aa23.38■■□□□ 1.33
SLC8B1-204ENST00000548477 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
SLC8B1-204ENST00000548477 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
SLC8B1-204ENST00000548477 PTPRUQ92729 1446 aa23.36■■□□□ 1.33
SLC8B1-204ENST00000548477 PLEKHF1Q96S99 279 aa23.36■■□□□ 1.33
SLC8B1-204ENST00000548477 AKAP12Q02952 1782 aa23.35■■□□□ 1.33
SLC8B1-204ENST00000548477 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
SLC8B1-204ENST00000548477 MAP2P11137 1827 aaKnown RBP23.34■■□□□ 1.33
SLC8B1-204ENST00000548477 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
SLC8B1-204ENST00000548477 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
SLC8B1-204ENST00000548477 RARSP54136 660 aaKnown RBP23.34■■□□□ 1.33
SLC8B1-204ENST00000548477 NEFMP07197 916 aa23.33■■□□□ 1.33
SLC8B1-204ENST00000548477 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.33
SLC8B1-204ENST00000548477 PDE4AP27815 886 aa23.33■■□□□ 1.33
SLC8B1-204ENST00000548477 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
SLC8B1-204ENST00000548477 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.33
SLC8B1-204ENST00000548477 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.32■■□□□ 1.32
SLC8B1-204ENST00000548477 ANKLE2Q86XL3 938 aa23.31■■□□□ 1.32
SLC8B1-204ENST00000548477 FRAT1Q92837 279 aaPredicted RBP23.31■■□□□ 1.32
SLC8B1-204ENST00000548477 LRRC7Q96NW7 1537 aa23.3■■□□□ 1.32
SLC8B1-204ENST00000548477 AAMPQ13685 434 aa23.3■■□□□ 1.32
SLC8B1-204ENST00000548477 BACH2Q9BYV9 841 aa23.3■■□□□ 1.32
SLC8B1-204ENST00000548477 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
SLC8B1-204ENST00000548477 IL16Q14005 1332 aa23.3■■□□□ 1.32
SLC8B1-204ENST00000548477 FCHSD2O94868 740 aa23.29■■□□□ 1.32
SLC8B1-204ENST00000548477 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
SLC8B1-204ENST00000548477 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
SLC8B1-204ENST00000548477 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
SLC8B1-204ENST00000548477 PIK3R4Q99570 1358 aa23.29■■□□□ 1.32
SLC8B1-204ENST00000548477 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
SLC8B1-204ENST00000548477 COG3Q96JB2 828 aa23.28■■□□□ 1.32
SLC8B1-204ENST00000548477 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
SLC8B1-204ENST00000548477 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
SLC8B1-204ENST00000548477 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
SLC8B1-204ENST00000548477 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
SLC8B1-204ENST00000548477 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 IPO9Q96P70 1041 aaKnown RBP23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 RIPK4P57078 832 aa23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 NME9Q86XW9 330 aa23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
SLC8B1-204ENST00000548477 PANK1Q8TE04 598 aa23.25■■□□□ 1.31
SLC8B1-204ENST00000548477 COG6Q9Y2V7 657 aa23.25■■□□□ 1.31
SLC8B1-204ENST00000548477 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
SLC8B1-204ENST00000548477 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
SLC8B1-204ENST00000548477 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
SLC8B1-204ENST00000548477 BCL2L13Q9BXK5 485 aa23.21■■□□□ 1.31
SLC8B1-204ENST00000548477 NRKQ7Z2Y5 1582 aa23.21■■□□□ 1.31
SLC8B1-204ENST00000548477 PRR36Q9H6K5 1346 aa23.21■■□□□ 1.31
SLC8B1-204ENST00000548477 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
SLC8B1-204ENST00000548477 NPHP4O75161 1426 aaPredicted RBP23.2■■□□□ 1.3
SLC8B1-204ENST00000548477 ZKSCAN2Q63HK3 967 aa23.19■■□□□ 1.3
SLC8B1-204ENST00000548477 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
SLC8B1-204ENST00000548477 SKAP1Q86WV1 359 aa23.19■■□□□ 1.3
SLC8B1-204ENST00000548477 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
SLC8B1-204ENST00000548477 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 EXOSC9Q06265 439 aaKnown RBP23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 FTSJ3Q8IY81 847 aaKnown RBP23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 SMC4Q9NTJ3 1288 aa23.18■■□□□ 1.3
SLC8B1-204ENST00000548477 FBLN1P23142 703 aa23.17■■□□□ 1.3
SLC8B1-204ENST00000548477 KCNA6P17658 529 aa23.16■■□□□ 1.3
SLC8B1-204ENST00000548477 IL13P35225 146 aa23.16■■□□□ 1.3
SLC8B1-204ENST00000548477 NFE2L2Q16236 605 aa23.15■■□□□ 1.3
SLC8B1-204ENST00000548477 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
SLC8B1-204ENST00000548477 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
SLC8B1-204ENST00000548477 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
SLC8B1-204ENST00000548477 HMOX1P09601 288 aa23.14■■□□□ 1.29
SLC8B1-204ENST00000548477 RGS3P49796 1198 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms