RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 RALBP1Q15311 655 aa39.17■■■■□ 3.86
BRF1-213ENST00000548421 TTC21BQ7Z4L5 1316 aa39.17■■■■□ 3.86
BRF1-213ENST00000548421 FOXO3O43524 673 aa39.16■■■■□ 3.86
BRF1-213ENST00000548421 BRINP3Q76B58 766 aa39.16■■■■□ 3.86
BRF1-213ENST00000548421 PSME1Q06323 249 aa39.15■■■■□ 3.86
BRF1-213ENST00000548421 TTC21AQ8NDW8 1320 aa39.14■■■■□ 3.86
BRF1-213ENST00000548421 FYB1O15117 783 aa39.14■■■■□ 3.86
BRF1-213ENST00000548421 TRPM3Q9HCF6 1732 aaPredicted RBP39.11■■■■□ 3.85
BRF1-213ENST00000548421 NPHP3Q7Z494 1330 aa39.1■■■■□ 3.85
BRF1-213ENST00000548421 GGNBP2Q9H3C7 697 aa39.1■■■■□ 3.85
BRF1-213ENST00000548421 PIK3C2AO00443 1686 aa39.08■■■■□ 3.85
BRF1-213ENST00000548421 NME9Q86XW9 330 aa39.08■■■■□ 3.85
BRF1-213ENST00000548421 ROBO1Q9Y6N7 1651 aa39.06■■■■□ 3.84
BRF1-213ENST00000548421 MORC1Q86VD1 984 aa39.06■■■■□ 3.84
BRF1-213ENST00000548421 NHSL1Q5SYE7 1610 aa39.06■■■■□ 3.84
BRF1-213ENST00000548421 KRT28Q7Z3Y7 464 aa39.05■■■■□ 3.84
BRF1-213ENST00000548421 CERKQ8TCT0 537 aa39.05■■■■□ 3.84
BRF1-213ENST00000548421 MYBBP1AQ9BQG0 1328 aaKnown RBP39.04■■■■□ 3.84
BRF1-213ENST00000548421 TOM1O60784 492 aa39.04■■■■□ 3.84
BRF1-213ENST00000548421 PAK3O75914 559 aaPredicted RBP39.04■■■■□ 3.84
BRF1-213ENST00000548421 PXDNQ92626 1479 aa39.03■■■■□ 3.84
BRF1-213ENST00000548421 XPCQ01831 940 aaPredicted RBP39.03■■■■□ 3.84
BRF1-213ENST00000548421 USP54Q70EL1 1684 aa39.02■■■■□ 3.84
BRF1-213ENST00000548421 DDX17Q92841 729 aaKnown RBP39.01■■■■□ 3.84
BRF1-213ENST00000548421 OVOS2A0A0J9YW53 1432 aa39■■■■□ 3.83
BRF1-213ENST00000548421 OVOS2Q6IE36 1432 aa39■■■■□ 3.83
BRF1-213ENST00000548421 CCER2I3L3R5 266 aa38.99■■■■□ 3.83
BRF1-213ENST00000548421 FBXO41Q8TF61 875 aa38.99■■■■□ 3.83
BRF1-213ENST00000548421 COG3Q96JB2 828 aa38.99■■■■□ 3.83
BRF1-213ENST00000548421 USP31Q70CQ4 1352 aa38.99■■■■□ 3.83
BRF1-213ENST00000548421 ALS2Q96Q42 1657 aa38.98■■■■□ 3.83
BRF1-213ENST00000548421 ZRANB1Q9UGI0 708 aa38.98■■■■□ 3.83
BRF1-213ENST00000548421 SBNO1A3KN83 1393 aa38.97■■■■□ 3.83
BRF1-213ENST00000548421 ABTB2Q8N961 1025 aa38.97■■■■□ 3.83
BRF1-213ENST00000548421 MARF1Q9Y4F3 1742 aaKnown RBP38.96■■■■□ 3.83
BRF1-213ENST00000548421 UBAP1LF5GYI3 381 aa38.93■■■■□ 3.82
BRF1-213ENST00000548421 PPP2R1AP30153 589 aa38.93■■■■□ 3.82
BRF1-213ENST00000548421 AHDC1Q5TGY3 1603 aaPredicted RBP38.93■■■■□ 3.82
BRF1-213ENST00000548421 SOS2Q07890 1332 aaPredicted RBP38.93■■■■□ 3.82
BRF1-213ENST00000548421 SCAF1Q9H7N4 1312 aaKnown RBP38.93■■■■□ 3.82
BRF1-213ENST00000548421 NLRP13Q86W25 1043 aa38.92■■■■□ 3.82
BRF1-213ENST00000548421 TNNT2P45379 298 aaPredicted RBP38.92■■■■□ 3.82
BRF1-213ENST00000548421 TNS3Q68CZ2 1445 aa38.91■■■■□ 3.82
BRF1-213ENST00000548421 NLRP6P59044 892 aa38.91■■■■□ 3.82
BRF1-213ENST00000548421 NUTM2GQ5VZR2 741 aa38.86■■■■□ 3.81
BRF1-213ENST00000548421 SPATA31A3Q5VYP0 1347 aa38.85■■■■□ 3.81
BRF1-213ENST00000548421 MAP2P11137 1827 aaKnown RBP38.85■■■■□ 3.81
BRF1-213ENST00000548421 PIP4K2BP78356 416 aa38.85■■■■□ 3.81
BRF1-213ENST00000548421 LMOD2Q6P5Q4 547 aa38.84■■■■□ 3.81
BRF1-213ENST00000548421 AATKQ6ZMQ8 1374 aa38.83■■■■□ 3.81
BRF1-213ENST00000548421 ARHGEF10O15013 1369 aa38.83■■■■□ 3.81
BRF1-213ENST00000548421 MRS2Q9HD23 443 aa38.81■■■■□ 3.8
BRF1-213ENST00000548421 CCDC184Q52MB2 194 aa38.8■■■■□ 3.8
BRF1-213ENST00000548421 PHLPP1O60346 1717 aa38.8■■■■□ 3.8
BRF1-213ENST00000548421 SLIT3O75094 1523 aa38.78■■■■□ 3.8
BRF1-213ENST00000548421 MED1Q15648 1581 aaPredicted RBP38.77■■■■□ 3.8
BRF1-213ENST00000548421 USP19O94966 1318 aa38.76■■■■□ 3.8
BRF1-213ENST00000548421 MTHFSP49914 203 aa38.74■■■■□ 3.79
BRF1-213ENST00000548421 SMG6Q86US8 1419 aaKnown RBP38.74■■■■□ 3.79
BRF1-213ENST00000548421 CRYBG1Q9Y4K1 1723 aa38.74■■■■□ 3.79
BRF1-213ENST00000548421 FBLN1P23142 703 aa38.73■■■■□ 3.79
BRF1-213ENST00000548421 COL16A1Q07092 1604 aaPredicted RBP38.73■■■■□ 3.79
BRF1-213ENST00000548421 PHRF1Q9P1Y6 1649 aaKnown RBP38.73■■■■□ 3.79
BRF1-213ENST00000548421 NFAT5O94916 1531 aa38.72■■■■□ 3.79
BRF1-213ENST00000548421 SOX12O15370 315 aa38.72■■■■□ 3.79
BRF1-213ENST00000548421 POLKQ9UBT6 870 aa38.72■■■■□ 3.79
BRF1-213ENST00000548421 KCNH5Q8NCM2 988 aa38.71■■■■□ 3.79
BRF1-213ENST00000548421 LRRC59Q96AG4 307 aaKnown RBP38.7■■■■□ 3.79
BRF1-213ENST00000548421 RRS1Q15050 365 aaKnown RBP38.68■■■■□ 3.78
BRF1-213ENST00000548421 LTN1O94822 1766 aa38.68■■■■□ 3.78
BRF1-213ENST00000548421 CFAP53Q96M91 514 aa38.66■■■■□ 3.78
BRF1-213ENST00000548421 EMILIN1Q9Y6C2 1016 aa38.66■■■■□ 3.78
BRF1-213ENST00000548421 CDK12Q9NYV4 1490 aaPredicted RBP38.66■■■■□ 3.78
BRF1-213ENST00000548421 GCP02774 474 aa38.66■■■■□ 3.78
BRF1-213ENST00000548421 ABCA3Q99758 1704 aa38.65■■■■□ 3.78
BRF1-213ENST00000548421 PEAK1Q9H792 1746 aa38.63■■■■□ 3.78
BRF1-213ENST00000548421 PPM1GO15355 546 aaPredicted RBP38.62■■■■□ 3.77
BRF1-213ENST00000548421 PLEKHG5O94827 1062 aa38.62■■■■□ 3.77
BRF1-213ENST00000548421 MAP3K19Q56UN5 1328 aa38.62■■■■□ 3.77
BRF1-213ENST00000548421 PNPLA6Q8IY17 1366 aa38.62■■■■□ 3.77
BRF1-213ENST00000548421 COL22A1Q8NFW1 1626 aaPredicted RBP38.62■■■■□ 3.77
BRF1-213ENST00000548421 COL3A1P02461 1466 aaPredicted RBP38.61■■■■□ 3.77
BRF1-213ENST00000548421 INSRP06213 1382 aa38.6■■■■□ 3.77
BRF1-213ENST00000548421 PNISRQ8TF01 805 aaKnown RBP38.6■■■■□ 3.77
BRF1-213ENST00000548421 KIF24Q5T7B8 1368 aa38.59■■■■□ 3.77
BRF1-213ENST00000548421 SHPRHQ149N8 1683 aa38.58■■■■□ 3.77
BRF1-213ENST00000548421 CABLES1Q8TDN4 633 aa38.58■■■■□ 3.77
BRF1-213ENST00000548421 FLT4P35916 1363 aa38.56■■■■□ 3.76
BRF1-213ENST00000548421 RTL1A6NKG5 1358 aa38.55■■■■□ 3.76
BRF1-213ENST00000548421 AMPHP49418 695 aa38.54■■■■□ 3.76
BRF1-213ENST00000548421 ARHGEF25Q86VW2 580 aa38.52■■■■□ 3.76
BRF1-213ENST00000548421 FAM9BQ8IZU0 186 aa38.52■■■■□ 3.76
BRF1-213ENST00000548421 DIAPH1O60610 1272 aaKnown RBP38.48■■■■□ 3.75
BRF1-213ENST00000548421 HAP1P54257 671 aaPredicted RBP38.48■■■■□ 3.75
BRF1-213ENST00000548421 WDR43Q15061 677 aaKnown RBP eCLIP38.48■■■■□ 3.75
BRF1-213ENST00000548421 HOXC9P31274 260 aa38.47■■■■□ 3.75
BRF1-213ENST00000548421 ZC3H6P61129 1189 aaKnown RBP38.47■■■■□ 3.75
BRF1-213ENST00000548421 CPDO75976 1380 aa38.47■■■■□ 3.75
BRF1-213ENST00000548421 HSP90AB2PQ58FF8 381 aa38.46■■■■□ 3.75
BRF1-213ENST00000548421 ZBTB7CA1YPR0 619 aa38.45■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms