RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	AKAP12	Q02952	1782 aa		13.58	□□□□□ -0.23
NPIPA1-208	ENST00000545831	GGNBP2	Q9H3C7	697 aa		13.58	□□□□□ -0.24
NPIPA1-208	ENST00000545831	MON2	Q7Z3U7	1717 aa		13.57	□□□□□ -0.24
NPIPA1-208	ENST00000545831	FOXO3	O43524	673 aa		13.57	□□□□□ -0.24
NPIPA1-208	ENST00000545831	PAK3	O75914	559 aa	Predicted RBP	13.56	□□□□□ -0.24
NPIPA1-208	ENST00000545831	NLRP13	Q86W25	1043 aa		13.56	□□□□□ -0.24
NPIPA1-208	ENST00000545831	NME9	Q86XW9	330 aa		13.56	□□□□□ -0.24
NPIPA1-208	ENST00000545831	COG3	Q96JB2	828 aa		13.56	□□□□□ -0.24
NPIPA1-208	ENST00000545831	KIF1A	Q12756	1690 aa		13.56	□□□□□ -0.24
NPIPA1-208	ENST00000545831	PPP2R1A	P30153	589 aa		13.55	□□□□□ -0.24
NPIPA1-208	ENST00000545831	KRT28	Q7Z3Y7	464 aa		13.55	□□□□□ -0.24
NPIPA1-208	ENST00000545831	MRS2	Q9HD23	443 aa		13.55	□□□□□ -0.24
NPIPA1-208	ENST00000545831	NPHP3	Q7Z494	1330 aa		13.55	□□□□□ -0.24
NPIPA1-208	ENST00000545831	SSH2	Q76I76	1423 aa		13.55	□□□□□ -0.24
NPIPA1-208	ENST00000545831	BRINP3	Q76B58	766 aa		13.54	□□□□□ -0.24
NPIPA1-208	ENST00000545831	TNNT2	P45379	298 aa	Predicted RBP	13.53	□□□□□ -0.24
NPIPA1-208	ENST00000545831	ABTB2	Q8N961	1025 aa		13.53	□□□□□ -0.24
NPIPA1-208	ENST00000545831	KIF20B	Q96Q89	1820 aa		13.53	□□□□□ -0.24
NPIPA1-208	ENST00000545831	TOM1	O60784	492 aa		13.52	□□□□□ -0.25
NPIPA1-208	ENST00000545831	NLRP6	P59044	892 aa		13.52	□□□□□ -0.25
NPIPA1-208	ENST00000545831	SCAF1	Q9H7N4	1312 aa	Known RBP	13.52	□□□□□ -0.25
NPIPA1-208	ENST00000545831	NRK	Q7Z2Y5	1582 aa		13.51	□□□□□ -0.25
NPIPA1-208	ENST00000545831	USP31	Q70CQ4	1352 aa		13.51	□□□□□ -0.25
NPIPA1-208	ENST00000545831	XPC	Q01831	940 aa	Predicted RBP	13.51	□□□□□ -0.25
NPIPA1-208	ENST00000545831	ZRANB1	Q9UGI0	708 aa		13.51	□□□□□ -0.25
NPIPA1-208	ENST00000545831	CCDC184	Q52MB2	194 aa		13.5	□□□□□ -0.25
NPIPA1-208	ENST00000545831	CFAP53	Q96M91	514 aa		13.5	□□□□□ -0.25
NPIPA1-208	ENST00000545831	ANKRD26	Q9UPS8	1709 aa		13.5	□□□□□ -0.25
NPIPA1-208	ENST00000545831	SBNO1	A3KN83	1393 aa		13.49	□□□□□ -0.25
NPIPA1-208	ENST00000545831	LMOD2	Q6P5Q4	547 aa		13.49	□□□□□ -0.25
NPIPA1-208	ENST00000545831	IQSEC2	Q5JU85	1478 aa		13.48	□□□□□ -0.25
NPIPA1-208	ENST00000545831	MTHFS	P49914	203 aa		13.48	□□□□□ -0.25
NPIPA1-208	ENST00000545831	NUTM2G	Q5VZR2	741 aa		13.48	□□□□□ -0.25
NPIPA1-208	ENST00000545831	CERK	Q8TCT0	537 aa		13.48	□□□□□ -0.25
NPIPA1-208	ENST00000545831	DDX17	Q92841	729 aa	Known RBP	13.48	□□□□□ -0.25
NPIPA1-208	ENST00000545831	OVOS2	A0A0J9YW53	1432 aa		13.47	□□□□□ -0.25
NPIPA1-208	ENST00000545831	OVOS2	Q6IE36	1432 aa		13.47	□□□□□ -0.25
NPIPA1-208	ENST00000545831	AATK	Q6ZMQ8	1374 aa		13.47	□□□□□ -0.25
NPIPA1-208	ENST00000545831	UBAP1L	F5GYI3	381 aa		13.46	□□□□□ -0.25
NPIPA1-208	ENST00000545831	FAM9B	Q8IZU0	186 aa		13.46	□□□□□ -0.25
NPIPA1-208	ENST00000545831	KCNH5	Q8NCM2	988 aa		13.46	□□□□□ -0.25
NPIPA1-208	ENST00000545831	SOS2	Q07890	1332 aa	Predicted RBP	13.45	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PNISR	Q8TF01	805 aa	Known RBP	13.45	□□□□□ -0.26
NPIPA1-208	ENST00000545831	POLK	Q9UBT6	870 aa		13.45	□□□□□ -0.26
NPIPA1-208	ENST00000545831	ARHGEF10	O15013	1369 aa		13.45	□□□□□ -0.26
NPIPA1-208	ENST00000545831	SPATA31A3	Q5VYP0	1347 aa		13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PIK3C2A	O00443	1686 aa		13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PXDN	Q92626	1479 aa		13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PPM1G	O15355	546 aa	Predicted RBP	13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	SOX12	O15370	315 aa		13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	WDR43	Q15061	677 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	TNS3	Q68CZ2	1445 aa		13.44	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PIP4K2B	P78356	416 aa		13.43	□□□□□ -0.26
NPIPA1-208	ENST00000545831	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.43	□□□□□ -0.26
NPIPA1-208	ENST00000545831	NUDC	Q9Y266	331 aa		13.43	□□□□□ -0.26
NPIPA1-208	ENST00000545831	FBLN1	P23142	703 aa		13.42	□□□□□ -0.26
NPIPA1-208	ENST00000545831	RRS1	Q15050	365 aa	Known RBP	13.42	□□□□□ -0.26
NPIPA1-208	ENST00000545831	GC	P02774	474 aa		13.41	□□□□□ -0.26
NPIPA1-208	ENST00000545831	AMPH	P49418	695 aa		13.41	□□□□□ -0.26
NPIPA1-208	ENST00000545831	LRRC59	Q96AG4	307 aa	Known RBP	13.41	□□□□□ -0.26
NPIPA1-208	ENST00000545831	EMILIN1	Q9Y6C2	1016 aa		13.41	□□□□□ -0.26
NPIPA1-208	ENST00000545831	USP54	Q70EL1	1684 aa		13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	ROBO1	Q9Y6N7	1651 aa		13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	USP19	O94966	1318 aa		13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	DIAPH1	O60610	1272 aa	Known RBP	13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	PLEKHG5	O94827	1062 aa		13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	YTHDC1	Q96MU7	727 aa	Known RBP	13.4	□□□□□ -0.26
NPIPA1-208	ENST00000545831	MAP3K19	Q56UN5	1328 aa		13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	SMG6	Q86US8	1419 aa	Known RBP	13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	NHSL1	Q5SYE7	1610 aa		13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	INSR	P06213	1382 aa		13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	PNPLA6	Q8IY17	1366 aa		13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	ALS2	Q96Q42	1657 aa		13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	MAP2	P11137	1827 aa	Known RBP	13.39	□□□□□ -0.27
NPIPA1-208	ENST00000545831	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.38	□□□□□ -0.27
NPIPA1-208	ENST00000545831	KIF24	Q5T7B8	1368 aa		13.38	□□□□□ -0.27
NPIPA1-208	ENST00000545831	HAP1	P54257	671 aa	Predicted RBP	13.38	□□□□□ -0.27
NPIPA1-208	ENST00000545831	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.38	□□□□□ -0.27
NPIPA1-208	ENST00000545831	SLIT3	O75094	1523 aa		13.38	□□□□□ -0.27
NPIPA1-208	ENST00000545831	ZBTB7C	A1YPR0	619 aa		13.37	□□□□□ -0.27
NPIPA1-208	ENST00000545831	ADAMTS8	Q9UP79	889 aa		13.37	□□□□□ -0.27
NPIPA1-208	ENST00000545831	FLT4	P35916	1363 aa		13.36	□□□□□ -0.27
NPIPA1-208	ENST00000545831	U2SURP	O15042	1029 aa	Known RBP	13.36	□□□□□ -0.27
NPIPA1-208	ENST00000545831	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPA1-208	ENST00000545831	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
NPIPA1-208	ENST00000545831	MARF1	Q9Y4F3	1742 aa	Known RBP	13.36	□□□□□ -0.27
NPIPA1-208	ENST00000545831	RTL1	A6NKG5	1358 aa		13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	HOXC9	P31274	260 aa		13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	ARHGEF25	Q86VW2	580 aa		13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	CABLES1	Q8TDN4	633 aa		13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	IP6K1	Q92551	441 aa		13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	PNN	Q9H307	717 aa	Known RBP	13.35	□□□□□ -0.27
NPIPA1-208	ENST00000545831	NFAT5	O94916	1531 aa		13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	MED1	Q15648	1581 aa	Predicted RBP	13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	IL13	P35225	146 aa		13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	ZC3H6	P61129	1189 aa	Known RBP	13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	HSP90AB2P	Q58FF8	381 aa		13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	COL3A1	P02461	1466 aa	Predicted RBP	13.34	□□□□□ -0.27
NPIPA1-208	ENST00000545831	PHLPP1	O60346	1717 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms