RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 SEC24BO95487 1268 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
SCAP-215ENST00000545718 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
SCAP-215ENST00000545718 PREX1Q8TCU6 1659 aa19.97■□□□□ 0.79
SCAP-215ENST00000545718 HMOX1P09601 288 aa19.97■□□□□ 0.79
SCAP-215ENST00000545718 ESF1Q9H501 851 aaKnown RBP19.97■□□□□ 0.79
SCAP-215ENST00000545718 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
SCAP-215ENST00000545718 SSH1Q8WYL5 1049 aa19.96■□□□□ 0.79
SCAP-215ENST00000545718 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
SCAP-215ENST00000545718 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
SCAP-215ENST00000545718 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
SCAP-215ENST00000545718 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
SCAP-215ENST00000545718 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
SCAP-215ENST00000545718 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
SCAP-215ENST00000545718 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
SCAP-215ENST00000545718 TRIM27P14373 513 aa19.93■□□□□ 0.78
SCAP-215ENST00000545718 NOB1Q9ULX3 412 aaKnown RBP19.93■□□□□ 0.78
SCAP-215ENST00000545718 ALKQ9UM73 1620 aa19.92■□□□□ 0.78
SCAP-215ENST00000545718 THUMPD2Q9BTF0 503 aaKnown RBP19.92■□□□□ 0.78
SCAP-215ENST00000545718 CD163L1Q9NR16 1453 aa19.92■□□□□ 0.78
SCAP-215ENST00000545718 NFKBIBQ15653 356 aa19.92■□□□□ 0.78
SCAP-215ENST00000545718 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
SCAP-215ENST00000545718 NCKAP5LQ9HCH0 1330 aa19.91■□□□□ 0.78
SCAP-215ENST00000545718 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
SCAP-215ENST00000545718 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
SCAP-215ENST00000545718 POLKQ9UBT6 870 aa19.9■□□□□ 0.78
SCAP-215ENST00000545718 NME9Q86XW9 330 aa19.9■□□□□ 0.78
SCAP-215ENST00000545718 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.78
SCAP-215ENST00000545718 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.78
SCAP-215ENST00000545718 ATF7IPQ6VMQ6 1270 aa19.89■□□□□ 0.77
SCAP-215ENST00000545718 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
SCAP-215ENST00000545718 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
SCAP-215ENST00000545718 UPF2Q9HAU5 1272 aaKnown RBP19.88■□□□□ 0.77
SCAP-215ENST00000545718 AAMPQ13685 434 aa19.87■□□□□ 0.77
SCAP-215ENST00000545718 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
SCAP-215ENST00000545718 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
SCAP-215ENST00000545718 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
SCAP-215ENST00000545718 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
SCAP-215ENST00000545718 FCHSD2O94868 740 aa19.86■□□□□ 0.77
SCAP-215ENST00000545718 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
SCAP-215ENST00000545718 RRS1Q15050 365 aaKnown RBP19.86■□□□□ 0.77
SCAP-215ENST00000545718 USP19O94966 1318 aa19.86■□□□□ 0.77
SCAP-215ENST00000545718 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
SCAP-215ENST00000545718 DDX19BQ9UMR2 479 aa19.86■□□□□ 0.77
SCAP-215ENST00000545718 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
SCAP-215ENST00000545718 ADGRB2O60241 1585 aa19.84■□□□□ 0.77
SCAP-215ENST00000545718 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
SCAP-215ENST00000545718 NCBP3Q53F19 620 aaKnown RBP19.84■□□□□ 0.77
SCAP-215ENST00000545718 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
SCAP-215ENST00000545718 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
SCAP-215ENST00000545718 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.76
SCAP-215ENST00000545718 METP08581 1390 aa19.82■□□□□ 0.76
SCAP-215ENST00000545718 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
SCAP-215ENST00000545718 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
SCAP-215ENST00000545718 FRAT2O75474 233 aaPredicted RBP19.82■□□□□ 0.76
SCAP-215ENST00000545718 SOX12O15370 315 aa19.82■□□□□ 0.76
SCAP-215ENST00000545718 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
SCAP-215ENST00000545718 COG3Q96JB2 828 aa19.81■□□□□ 0.76
SCAP-215ENST00000545718 IL16Q14005 1332 aa19.81■□□□□ 0.76
SCAP-215ENST00000545718 BECN1Q14457 450 aa19.81■□□□□ 0.76
SCAP-215ENST00000545718 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
SCAP-215ENST00000545718 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
SCAP-215ENST00000545718 SPRYD3Q8NCJ5 442 aa19.8■□□□□ 0.76
SCAP-215ENST00000545718 MFAP1P55081 439 aaKnown RBP19.79■□□□□ 0.76
SCAP-215ENST00000545718 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
SCAP-215ENST00000545718 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
SCAP-215ENST00000545718 MED14O60244 1454 aa19.79■□□□□ 0.76
SCAP-215ENST00000545718 TSPYL6Q8N831 410 aa19.78■□□□□ 0.76
SCAP-215ENST00000545718 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
SCAP-215ENST00000545718 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
SCAP-215ENST00000545718 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
SCAP-215ENST00000545718 DCTN1Q14203 1278 aa19.77■□□□□ 0.76
SCAP-215ENST00000545718 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
SCAP-215ENST00000545718 C1orf115Q9H7X2 142 aa19.77■□□□□ 0.76
SCAP-215ENST00000545718 LRRC7Q96NW7 1537 aa19.77■□□□□ 0.76
SCAP-215ENST00000545718 FAM83GA6ND36 823 aa19.77■□□□□ 0.76
SCAP-215ENST00000545718 LNPKQ9C0E8 428 aa19.77■□□□□ 0.75
SCAP-215ENST00000545718 ZMYM3Q14202 1370 aa19.76■□□□□ 0.75
SCAP-215ENST00000545718 IL13P35225 146 aa19.75■□□□□ 0.75
SCAP-215ENST00000545718 ZBTB40Q9NUA8 1239 aa19.75■□□□□ 0.75
SCAP-215ENST00000545718 GSE1Q14687 1217 aa19.74■□□□□ 0.75
SCAP-215ENST00000545718 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
SCAP-215ENST00000545718 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
SCAP-215ENST00000545718 TBC1D32Q96NH3 1257 aa19.74■□□□□ 0.75
SCAP-215ENST00000545718 ATP7BP35670 1465 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 ANKRD26Q9UPS8 1709 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 GNAI1P63096 354 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 ALDH1L2Q3SY69 923 aa19.73■□□□□ 0.75
SCAP-215ENST00000545718 KIF20BQ96Q89 1820 aa19.72■□□□□ 0.75
SCAP-215ENST00000545718 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
SCAP-215ENST00000545718 CALD1Q05682 793 aaKnown RBP19.72■□□□□ 0.75
SCAP-215ENST00000545718 VAMP4O75379 141 aa19.71■□□□□ 0.75
SCAP-215ENST00000545718 MAP2P11137 1827 aaKnown RBP19.71■□□□□ 0.75
SCAP-215ENST00000545718 TWISTNBQ3B726 338 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms