RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 FYB1O15117 783 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 TNRQ92752 1358 aa12.48□□□□□ -0.41
DDX11-229ENST00000545668 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
DDX11-229ENST00000545668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX11-229ENST00000545668 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
DDX11-229ENST00000545668 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
DDX11-229ENST00000545668 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
DDX11-229ENST00000545668 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
DDX11-229ENST00000545668 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
DDX11-229ENST00000545668 ZMYND15Q9H091 742 aa12.46□□□□□ -0.41
DDX11-229ENST00000545668 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
DDX11-229ENST00000545668 MS4A1P11836 297 aa12.46□□□□□ -0.41
DDX11-229ENST00000545668 METP08581 1390 aa12.46□□□□□ -0.42
DDX11-229ENST00000545668 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
DDX11-229ENST00000545668 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
DDX11-229ENST00000545668 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
DDX11-229ENST00000545668 BCAR3O75815 825 aa12.44□□□□□ -0.42
DDX11-229ENST00000545668 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
DDX11-229ENST00000545668 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
DDX11-229ENST00000545668 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
DDX11-229ENST00000545668 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
DDX11-229ENST00000545668 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 GSE1Q14687 1217 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
DDX11-229ENST00000545668 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
DDX11-229ENST00000545668 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
DDX11-229ENST00000545668 DLC1Q96QB1 1528 aa12.41□□□□□ -0.42
DDX11-229ENST00000545668 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
DDX11-229ENST00000545668 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
DDX11-229ENST00000545668 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
DDX11-229ENST00000545668 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.42
DDX11-229ENST00000545668 FBLN1P23142 703 aa12.4□□□□□ -0.42
DDX11-229ENST00000545668 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
DDX11-229ENST00000545668 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
DDX11-229ENST00000545668 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
DDX11-229ENST00000545668 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.43
DDX11-229ENST00000545668 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
DDX11-229ENST00000545668 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
DDX11-229ENST00000545668 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
DDX11-229ENST00000545668 LTKP29376 864 aa12.39□□□□□ -0.43
DDX11-229ENST00000545668 SLC26A8Q96RN1 970 aa12.39□□□□□ -0.43
DDX11-229ENST00000545668 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
DDX11-229ENST00000545668 MED14O60244 1454 aa12.38□□□□□ -0.43
DDX11-229ENST00000545668 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
DDX11-229ENST00000545668 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
DDX11-229ENST00000545668 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
DDX11-229ENST00000545668 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
DDX11-229ENST00000545668 NME9Q86XW9 330 aa12.38□□□□□ -0.43
DDX11-229ENST00000545668 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
DDX11-229ENST00000545668 ATP7BP35670 1465 aa12.37□□□□□ -0.43
DDX11-229ENST00000545668 NLRP1Q9C000 1473 aa12.37□□□□□ -0.43
DDX11-229ENST00000545668 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
DDX11-229ENST00000545668 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
DDX11-229ENST00000545668 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 FAM135BQ49AJ0 1406 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 BECN1Q14457 450 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 COG3Q96JB2 828 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 RSPH6AQ9H0K4 717 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 RIPK4P57078 832 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 PLEKHF1Q96S99 279 aa12.36□□□□□ -0.43
DDX11-229ENST00000545668 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
DDX11-229ENST00000545668 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
DDX11-229ENST00000545668 PDE3AQ14432 1141 aa12.35□□□□□ -0.43
DDX11-229ENST00000545668 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
DDX11-229ENST00000545668 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
DDX11-229ENST00000545668 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
DDX11-229ENST00000545668 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
DDX11-229ENST00000545668 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
DDX11-229ENST00000545668 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
DDX11-229ENST00000545668 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
DDX11-229ENST00000545668 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
DDX11-229ENST00000545668 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
DDX11-229ENST00000545668 FCHSD2O94868 740 aa12.34□□□□□ -0.43
DDX11-229ENST00000545668 PLEKHG1Q9ULL1 1385 aa12.34□□□□□ -0.43
DDX11-229ENST00000545668 TECPR2O15040 1411 aa12.33□□□□□ -0.44
DDX11-229ENST00000545668 HMOX1P09601 288 aa12.33□□□□□ -0.44
DDX11-229ENST00000545668 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
DDX11-229ENST00000545668 THEMISQ8N1K5 641 aaPredicted RBP12.33□□□□□ -0.44
DDX11-229ENST00000545668 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
DDX11-229ENST00000545668 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
DDX11-229ENST00000545668 ADAMTS13Q76LX8 1427 aa12.33□□□□□ -0.44
DDX11-229ENST00000545668 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
DDX11-229ENST00000545668 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
DDX11-229ENST00000545668 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
DDX11-229ENST00000545668 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
DDX11-229ENST00000545668 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
DDX11-229ENST00000545668 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
DDX11-229ENST00000545668 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
DDX11-229ENST00000545668 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
DDX11-229ENST00000545668 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
DDX11-229ENST00000545668 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
DDX11-229ENST00000545668 IGHDP01880 384 aa12.3□□□□□ -0.44
DDX11-229ENST00000545668 ACEP12821 1306 aa12.29□□□□□ -0.44
DDX11-229ENST00000545668 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
DDX11-229ENST00000545668 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms