RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 EIF3JO75822 258 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 TPM3P06753 285 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 PLCG2P16885 1265 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 GTF2A1P52655 376 aaPredicted RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 SARNPP82979 210 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 CABP2Q9NPB3 220 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 CGNQ9P2M7 1197 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 PAXBP1Q9Y5B6 917 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 TESPA1A2RU30 521 aaPredicted RBP6.31□□□□□ -1.4
UBE4A-203ENST00000545354 ZKSCAN2Q63HK3 967 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 ILDR1Q86SU0 546 aaPredicted RBP6.31□□□□□ -1.4
UBE4A-203ENST00000545354 MPNDQ8N594 471 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 FAM13BQ9NYF5 915 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 EEA1Q15075 1411 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 CCDC196A0A1B0GTZ2 297 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 GOLGA6L6A8MZA4 724 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 GOLGA6L22H0YM25 854 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 TULP2O00295 520 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 CCP110O43303 1012 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 COPB2P35606 906 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 LRCH2Q5VUJ6 765 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 GOLGA6L1Q8N7Z2 621 aa6.31□□□□□ -1.4
UBE4A-203ENST00000545354 RAD50Q92878 1312 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 CFAP65Q6ZU64 1925 aaKnown RBP6.3□□□□□ -1.4
UBE4A-203ENST00000545354 EPB41L2O43491 1005 aaKnown RBP6.3□□□□□ -1.4
UBE4A-203ENST00000545354 OFD1O75665 1012 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 ITGAEP38570 1179 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 KCNJ4P48050 445 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 MAMSTRQ6ZN01 415 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 KIAA1211Q6ZU35 1233 aa6.3□□□□□ -1.4
UBE4A-203ENST00000545354 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 FOXD4Q12950 439 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 NFKBIBQ15653 356 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 KLHL10Q6JEL2 608 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 JMYQ8N9B5 988 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 FBXW7Q969H0 707 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 CFAP53Q96M91 514 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 KIF21AQ7Z4S6 1674 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 ANKRD62A6NC57 917 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 GABPB1Q06547 395 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 PUS10Q3MIT2 529 aaKnown RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 GET4Q7L5D6 327 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
UBE4A-203ENST00000545354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.29□□□□□ -1.44e-7■■□□□ 13.9
UBE4A-203ENST00000545354 AMOTL2Q9Y2J4 779 aa6.29□□□□□ -1.4
UBE4A-203ENST00000545354 SH3BP5O60239 455 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 HMGN5P82970 282 aaKnown RBP6.28□□□□□ -1.4
UBE4A-203ENST00000545354 P3H3Q8IVL6 736 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 EFCAB3Q8N7B9 438 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 METTL14Q9HCE5 456 aaKnown RBP6.28□□□□□ -1.4
UBE4A-203ENST00000545354 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 ZC3H4Q9UPT8 1303 aaKnown RBP6.28□□□□□ -1.4
UBE4A-203ENST00000545354 RAD54L2Q9Y4B4 1467 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 CASQ1P31415 396 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 KDM4CQ9H3R0 1056 aa6.28□□□□□ -1.4
UBE4A-203ENST00000545354 CWC25Q9NXE8 425 aaPredicted RBP6.28□□□□□ -1.4
UBE4A-203ENST00000545354 LAMC3Q9Y6N6 1575 aa6.27□□□□□ -1.41
UBE4A-203ENST00000545354 TBC1D10BQ4KMP7 808 aaPredicted RBP6.27□□□□□ -1.41
UBE4A-203ENST00000545354 ZC3H12AQ5D1E8 599 aaKnown RBP6.27□□□□□ -1.41
UBE4A-203ENST00000545354 CT47A1Q5JQC4 288 aaPredicted RBP6.27□□□□□ -1.41
UBE4A-203ENST00000545354 CCDC91Q7Z6B0 441 aa6.27□□□□□ -1.41
UBE4A-203ENST00000545354 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
UBE4A-203ENST00000545354 TEX13AQ9BXU3 409 aaPredicted RBP6.27□□□□□ -1.41
UBE4A-203ENST00000545354 RPS6KL1Q9Y6S9 549 aa6.27□□□□□ -1.41
UBE4A-203ENST00000545354 PDS5BQ9NTI5 1447 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 H0YHG0 523 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 FAM200BP0CF97 657 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 SCUBE2Q9NQ36 999 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 RPGRIP1LQ68CZ1 1315 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 ZBED9Q6R2W3 1325 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 PES1O00541 588 aaKnown RBP6.26□□□□□ -1.41
UBE4A-203ENST00000545354 MRE11P49959 708 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 RGL3Q3MIN7 710 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 ICE2Q659A1 982 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 PROCA1Q8NCQ7 364 aaPredicted RBP6.26□□□□□ -1.41
UBE4A-203ENST00000545354 CALR3Q96L12 384 aaKnown RBP6.26□□□□□ -1.41
UBE4A-203ENST00000545354 CWC15Q9P013 229 aaKnown RBP6.26□□□□□ -1.41
UBE4A-203ENST00000545354 COMMD10Q9Y6G5 202 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 RIMBP3CA6NJZ7 1639 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 RIMBP3BA6NNM3 1639 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 RIMBP3Q9UFD9 1639 aa6.26□□□□□ -1.41
UBE4A-203ENST00000545354 CBFA2T2O43439 604 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 GUCY2CP25092 1073 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 NAP1L1P55209 391 aaKnown RBP6.25□□□□□ -1.41
UBE4A-203ENST00000545354 NEXNQ0ZGT2 675 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 C11orf91Q3C1V1 193 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 ZNF771Q7L3S4 317 aaPredicted RBP6.25□□□□□ -1.41
UBE4A-203ENST00000545354 ATL2Q8NHH9 583 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 FEZ1Q99689 392 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 STK25O00506 426 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 ABCD1P33897 745 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 RHBDL3P58872 404 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 OGFOD1Q8N543 542 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms