RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
TNFAIP1-202ENST00000544907 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
TNFAIP1-202ENST00000544907 PNPLA6Q8IY17 1366 aa23.47■■□□□ 1.35
TNFAIP1-202ENST00000544907 FYB1O15117 783 aa23.47■■□□□ 1.35
TNFAIP1-202ENST00000544907 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
TNFAIP1-202ENST00000544907 AAMPQ13685 434 aa23.47■■□□□ 1.35
TNFAIP1-202ENST00000544907 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
TNFAIP1-202ENST00000544907 C20orf194Q5TEA3 1177 aa23.46■■□□□ 1.35
TNFAIP1-202ENST00000544907 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
TNFAIP1-202ENST00000544907 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
TNFAIP1-202ENST00000544907 CT47B1P0C2W7 299 aaPredicted RBP23.43■■□□□ 1.34
TNFAIP1-202ENST00000544907 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
TNFAIP1-202ENST00000544907 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
TNFAIP1-202ENST00000544907 CDC42BPGQ6DT37 1551 aa23.42■■□□□ 1.34
TNFAIP1-202ENST00000544907 KIF20BQ96Q89 1820 aa23.41■■□□□ 1.34
TNFAIP1-202ENST00000544907 MYH16Q9H6N6 1097 aa23.41■■□□□ 1.34
TNFAIP1-202ENST00000544907 CPS1P31327 1500 aa23.41■■□□□ 1.34
TNFAIP1-202ENST00000544907 ANP32AP39687 249 aaKnown RBP23.41■■□□□ 1.34
TNFAIP1-202ENST00000544907 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
TNFAIP1-202ENST00000544907 U2AF1L5P0DN76 240 aaPredicted RBP23.4■■□□□ 1.34
TNFAIP1-202ENST00000544907 U2AF1Q01081 240 aaKnown RBP eCLIP23.4■■□□□ 1.34
TNFAIP1-202ENST00000544907 CPSF1Q10570 1443 aaKnown RBP23.39■■□□□ 1.34
TNFAIP1-202ENST00000544907 GGNBP2Q9H3C7 697 aa23.39■■□□□ 1.34
TNFAIP1-202ENST00000544907 CABP1Q9NZU7 370 aa23.39■■□□□ 1.34
TNFAIP1-202ENST00000544907 SLC26A8Q96RN1 970 aa23.38■■□□□ 1.33
TNFAIP1-202ENST00000544907 PLEKHF1Q96S99 279 aa23.38■■□□□ 1.33
TNFAIP1-202ENST00000544907 BACH2Q9BYV9 841 aa23.38■■□□□ 1.33
TNFAIP1-202ENST00000544907 EDC4Q6P2E9 1401 aaKnown RBP23.37■■□□□ 1.33
TNFAIP1-202ENST00000544907 IL16Q14005 1332 aa23.37■■□□□ 1.33
TNFAIP1-202ENST00000544907 PDE4AP27815 886 aa23.37■■□□□ 1.33
TNFAIP1-202ENST00000544907 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
TNFAIP1-202ENST00000544907 BCAR3O75815 825 aa23.36■■□□□ 1.33
TNFAIP1-202ENST00000544907 METP08581 1390 aa23.36■■□□□ 1.33
TNFAIP1-202ENST00000544907 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
TNFAIP1-202ENST00000544907 RARSP54136 660 aaKnown RBP23.35■■□□□ 1.33
TNFAIP1-202ENST00000544907 IPO9Q96P70 1041 aaKnown RBP23.34■■□□□ 1.33
TNFAIP1-202ENST00000544907 TBX22Q9Y458 520 aa23.34■■□□□ 1.33
TNFAIP1-202ENST00000544907 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
TNFAIP1-202ENST00000544907 WAPLQ7Z5K2 1190 aa23.32■■□□□ 1.32
TNFAIP1-202ENST00000544907 AATKQ6ZMQ8 1374 aa23.32■■□□□ 1.32
TNFAIP1-202ENST00000544907 FCHSD2O94868 740 aa23.31■■□□□ 1.32
TNFAIP1-202ENST00000544907 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
TNFAIP1-202ENST00000544907 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
TNFAIP1-202ENST00000544907 NOP58Q9Y2X3 529 aaKnown RBP23.3■■□□□ 1.32
TNFAIP1-202ENST00000544907 MAPK8IP3Q9UPT6 1336 aa23.3■■□□□ 1.32
TNFAIP1-202ENST00000544907 PPIP5K1Q6PFW1 1433 aa23.3■■□□□ 1.32
TNFAIP1-202ENST00000544907 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
TNFAIP1-202ENST00000544907 PIK3R4Q99570 1358 aa23.29■■□□□ 1.32
TNFAIP1-202ENST00000544907 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
TNFAIP1-202ENST00000544907 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
TNFAIP1-202ENST00000544907 ZNF692Q9BU19 519 aaPredicted RBP23.27■■□□□ 1.32
TNFAIP1-202ENST00000544907 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
TNFAIP1-202ENST00000544907 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 CANXP27824 592 aaKnown RBP23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 ZNF335Q9H4Z2 1342 aaPredicted RBP23.26■■□□□ 1.31
TNFAIP1-202ENST00000544907 POLKQ9UBT6 870 aa23.25■■□□□ 1.31
TNFAIP1-202ENST00000544907 TRIM35Q9UPQ4 493 aa23.25■■□□□ 1.31
TNFAIP1-202ENST00000544907 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
TNFAIP1-202ENST00000544907 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
TNFAIP1-202ENST00000544907 XRN1Q8IZH2 1706 aaKnown RBP23.24■■□□□ 1.31
TNFAIP1-202ENST00000544907 PTPRUQ92729 1446 aa23.23■■□□□ 1.31
TNFAIP1-202ENST00000544907 KCNA6P17658 529 aa23.22■■□□□ 1.31
TNFAIP1-202ENST00000544907 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
TNFAIP1-202ENST00000544907 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
TNFAIP1-202ENST00000544907 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
TNFAIP1-202ENST00000544907 AMOTL2Q9Y2J4 779 aa23.2■■□□□ 1.3
TNFAIP1-202ENST00000544907 NEFMP07197 916 aa23.19■■□□□ 1.3
TNFAIP1-202ENST00000544907 LRRC7Q96NW7 1537 aa23.19■■□□□ 1.3
TNFAIP1-202ENST00000544907 FAM161AQ3B820 660 aa23.19■■□□□ 1.3
TNFAIP1-202ENST00000544907 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
TNFAIP1-202ENST00000544907 ZBTB47Q9UFB7 747 aaPredicted RBP23.19■■□□□ 1.3
TNFAIP1-202ENST00000544907 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
TNFAIP1-202ENST00000544907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
TNFAIP1-202ENST00000544907 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
TNFAIP1-202ENST00000544907 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
TNFAIP1-202ENST00000544907 RIPK4P57078 832 aa23.17■■□□□ 1.3
TNFAIP1-202ENST00000544907 PANK1Q8TE04 598 aa23.17■■□□□ 1.3
TNFAIP1-202ENST00000544907 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 ITSN1Q15811 1721 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 ZKSCAN2Q63HK3 967 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 COG6Q9Y2V7 657 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 TOPAZ1Q8N9V7 1692 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 PLEKHG3A1L390 1219 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 FRAT1Q92837 279 aaPredicted RBP23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 COG3Q96JB2 828 aa23.16■■□□□ 1.3
TNFAIP1-202ENST00000544907 IL13P35225 146 aa23.14■■□□□ 1.29
TNFAIP1-202ENST00000544907 BRPF1P55201 1214 aaPredicted RBP23.14■■□□□ 1.29
TNFAIP1-202ENST00000544907 DDRGK1Q96HY6 314 aa23.14■■□□□ 1.29
TNFAIP1-202ENST00000544907 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
TNFAIP1-202ENST00000544907 MVPQ14764 893 aaKnown RBP23.13■■□□□ 1.29
TNFAIP1-202ENST00000544907 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
TNFAIP1-202ENST00000544907 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
TNFAIP1-202ENST00000544907 IGHDP01880 384 aa23.12■■□□□ 1.29
TNFAIP1-202ENST00000544907 NFE2L2Q16236 605 aa23.12■■□□□ 1.29
TNFAIP1-202ENST00000544907 PRR36Q9H6K5 1346 aa23.12■■□□□ 1.29
TNFAIP1-202ENST00000544907 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
TNFAIP1-202ENST00000544907 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms