RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 NUTM2EB1AL46 878 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-220ENST00000544550 RBM6P78332 1123 aaKnown RBP6.57□□□□□ -1.36
SNHG1-220ENST00000544550 NUTM2DQ5VT03 806 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-220ENST00000544550 NUTM2AQ8IVF1 878 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-220ENST00000544550 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
SNHG1-220ENST00000544550 CEP162Q5TB80 1403 aa6.57□□□□□ -1.36
SNHG1-220ENST00000544550 COL16A1Q07092 1604 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-220ENST00000544550 NWD1Q149M9 1564 aa6.57□□□□□ -1.36
SNHG1-220ENST00000544550 EHBP1L1Q8N3D4 1523 aa6.56□□□□□ -1.36
SNHG1-220ENST00000544550 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
SNHG1-220ENST00000544550 NGLY1Q96IV0 654 aa6.56□□□□□ -1.36
SNHG1-220ENST00000544550 SLC26A8Q96RN1 970 aa6.56□□□□□ -1.36
SNHG1-220ENST00000544550 AFF2P51816 1311 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 AHDC1Q5TGY3 1603 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-220ENST00000544550 EIF2AK4Q9P2K8 1649 aaKnown RBP6.55□□□□□ -1.36
SNHG1-220ENST00000544550 CAMK2BQ13554 666 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 MICALL2Q8IY33 904 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 RBM33Q96EV2 1170 aaKnown RBP6.55□□□□□ -1.36
SNHG1-220ENST00000544550 QTRT2Q9H974 415 aaKnown RBP6.55□□□□□ -1.36
SNHG1-220ENST00000544550 GPHNQ9NQX3 736 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-220ENST00000544550 PLA2G2EQ9NZK7 142 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 RGS12O14924 1447 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 EFCAB6Q5THR3 1501 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 SHPRHQ149N8 1683 aa6.55□□□□□ -1.36
SNHG1-220ENST00000544550 ARHGEF5Q12774 1597 aa6.54□□□□□ -1.36
SNHG1-220ENST00000544550 ATF3P18847 181 aa6.54□□□□□ -1.36
SNHG1-220ENST00000544550 HDGFP51858 240 aaKnown RBP6.54□□□□□ -1.36
SNHG1-220ENST00000544550 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
SNHG1-220ENST00000544550 ARIH1Q9Y4X5 557 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-220ENST00000544550 TET3O43151 1660 aa6.54□□□□□ -1.36
SNHG1-220ENST00000544550 KDM5AP29375 1690 aaKnown RBP6.53□□□□□ -1.36
SNHG1-220ENST00000544550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.53□□□□□ -1.36
SNHG1-220ENST00000544550 C19orf44Q9H6X5 657 aa6.53□□□□□ -1.36
SNHG1-220ENST00000544550 SETD5Q9C0A6 1442 aa6.52□□□□□ -1.37
SNHG1-220ENST00000544550 LRRC59Q96AG4 307 aaKnown RBP6.52□□□□□ -1.37
SNHG1-220ENST00000544550 C8orf37Q96NL8 207 aa6.52□□□□□ -1.37
SNHG1-220ENST00000544550 HCSTQ9UBK5 93 aa6.52□□□□□ -1.37
SNHG1-220ENST00000544550 KANK1Q14678 1352 aa6.52□□□□□ -1.37
SNHG1-220ENST00000544550 MAST1Q9Y2H9 1570 aa6.52□□□□□ -1.37
SNHG1-220ENST00000544550 DUOX2Q9NRD8 1548 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 PIK3C2BO00750 1634 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 MROH1Q8NDA8 1641 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-220ENST00000544550 IDI1Q13907 227 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 PPP1R15BQ5SWA1 713 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 SLC52A1Q9NWF4 448 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 TBX22Q9Y458 520 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 PLEKHG1Q9ULL1 1385 aa6.51□□□□□ -1.37
SNHG1-220ENST00000544550 DIP2AQ14689 1571 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 SETBP1Q9Y6X0 1596 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 PIK3R4Q99570 1358 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 TESPA1A2RU30 521 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-220ENST00000544550 ANKRD13DQ6ZTN6 518 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 BRINP3Q76B58 766 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 TRPC5Q9UL62 973 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-220ENST00000544550 ADGRB3O60242 1522 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 DCCP43146 1447 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 ERBINQ96RT1 1412 aa6.5□□□□□ -1.37
SNHG1-220ENST00000544550 KIF3CO14782 793 aa6.49□□□□□ -1.37
SNHG1-220ENST00000544550 SEMA3EO15041 775 aa6.49□□□□□ -1.37
SNHG1-220ENST00000544550 FOXK1P85037 733 aa6.49□□□□□ -1.37
SNHG1-220ENST00000544550 DSG2Q14126 1118 aa6.49□□□□□ -1.37
SNHG1-220ENST00000544550 LMOD2Q6P5Q4 547 aa6.49□□□□□ -1.37
SNHG1-220ENST00000544550 CEP152O94986 1710 aa6.48□□□□□ -1.37
SNHG1-220ENST00000544550 RGS20O76081 388 aa6.48□□□□□ -1.37
SNHG1-220ENST00000544550 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.48□□□□□ -1.376e-32■□□□□ 8.9
SNHG1-220ENST00000544550 TMC2Q8TDI7 906 aa6.48□□□□□ -1.37
SNHG1-220ENST00000544550 USP21Q9UK80 565 aa6.48□□□□□ -1.37
SNHG1-220ENST00000544550 LMTK2Q8IWU2 1503 aa6.48□□□□□ -1.37
SNHG1-220ENST00000544550 PNPLA6Q8IY17 1366 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 KIF15Q9NS87 1388 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 ASXL1Q8IXJ9 1541 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-220ENST00000544550 ZFYVE9O95405 1425 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 NOS1P29475 1434 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 MYOM3Q5VTT5 1437 aa6.47□□□□□ -1.37
SNHG1-220ENST00000544550 C2orf72A6NCS6 295 aa6.46□□□□□ -1.38
SNHG1-220ENST00000544550 PBX2P40425 430 aa6.46□□□□□ -1.38
SNHG1-220ENST00000544550 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNHG1-220ENST00000544550 SF3B2Q13435 895 aaKnown RBP6.46□□□□□ -1.38
SNHG1-220ENST00000544550 EMILIN3Q9NT22 766 aa6.46□□□□□ -1.38
SNHG1-220ENST00000544550 RIMS2Q9UQ26 1411 aa6.46□□□□□ -1.38
SNHG1-220ENST00000544550 LRP5O75197 1615 aa6.46□□□□□ -1.38
SNHG1-220ENST00000544550 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-220ENST00000544550 BLMP54132 1417 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-220ENST00000544550 PTCH1Q13635 1447 aa6.45□□□□□ -1.38
SNHG1-220ENST00000544550 ADAMTS2O95450 1211 aa6.45□□□□□ -1.38
SNHG1-220ENST00000544550 PLPP6Q8IY26 295 aa6.45□□□□□ -1.38
SNHG1-220ENST00000544550 FNBP4Q8N3X1 1017 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-220ENST00000544550 ATRNO75882 1429 aa6.44□□□□□ -1.38
SNHG1-220ENST00000544550 MST1RQ04912 1400 aa6.44□□□□□ -1.38
SNHG1-220ENST00000544550 CHD2O14647 1828 aaKnown RBP6.44□□□□□ -1.38
SNHG1-220ENST00000544550 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
SNHG1-220ENST00000544550 AMOTL2Q9Y2J4 779 aa6.44□□□□□ -1.38
SNHG1-220ENST00000544550 RPRD2Q5VT52 1461 aaKnown RBP6.44□□□□□ -1.38
SNHG1-220ENST00000544550 TRPM2O94759 1503 aa6.44□□□□□ -1.38
SNHG1-220ENST00000544550 ADAMTS13Q76LX8 1427 aa6.43□□□□□ -1.38
SNHG1-220ENST00000544550 SMYD5Q6GMV2 418 aa6.43□□□□□ -1.38
SNHG1-220ENST00000544550 GPR153Q6NV75 609 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms