RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 BRD4O60885 1362 aaPredicted RBP28.67■■■□□ 2.18
COMMD5-207ENST00000543949 LTBP4Q8N2S1 1624 aa28.66■■■□□ 2.18
COMMD5-207ENST00000543949 GGNBP2Q9H3C7 697 aa28.66■■■□□ 2.18
COMMD5-207ENST00000543949 TTC21BQ7Z4L5 1316 aa28.65■■■□□ 2.18
COMMD5-207ENST00000543949 PPP2R1AP30153 589 aa28.64■■■□□ 2.18
COMMD5-207ENST00000543949 SSH2Q76I76 1423 aa28.64■■■□□ 2.18
COMMD5-207ENST00000543949 TTC21AQ8NDW8 1320 aa28.64■■■□□ 2.17
COMMD5-207ENST00000543949 CCDC184Q52MB2 194 aa28.63■■■□□ 2.17
COMMD5-207ENST00000543949 ORAI2Q96SN7 254 aa28.62■■■□□ 2.17
COMMD5-207ENST00000543949 NME9Q86XW9 330 aa28.61■■■□□ 2.17
COMMD5-207ENST00000543949 PSME1Q06323 249 aa28.58■■■□□ 2.17
COMMD5-207ENST00000543949 TNNT2P45379 298 aaPredicted RBP28.57■■■□□ 2.16
COMMD5-207ENST00000543949 COG3Q96JB2 828 aa28.57■■■□□ 2.16
COMMD5-207ENST00000543949 PIK3C2AO00443 1686 aa28.55■■■□□ 2.16
COMMD5-207ENST00000543949 FOXO3O43524 673 aa28.54■■■□□ 2.16
COMMD5-207ENST00000543949 SCAF1Q9H7N4 1312 aaKnown RBP28.53■■■□□ 2.16
COMMD5-207ENST00000543949 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
COMMD5-207ENST00000543949 OVOS2A0A0J9YW53 1432 aa28.52■■■□□ 2.16
COMMD5-207ENST00000543949 OVOS2Q6IE36 1432 aa28.52■■■□□ 2.16
COMMD5-207ENST00000543949 USP54Q70EL1 1684 aa28.52■■■□□ 2.16
COMMD5-207ENST00000543949 PAK3O75914 559 aaPredicted RBP28.51■■■□□ 2.15
COMMD5-207ENST00000543949 TRPM3Q9HCF6 1732 aaPredicted RBP28.51■■■□□ 2.15
COMMD5-207ENST00000543949 ZRANB1Q9UGI0 708 aa28.5■■■□□ 2.15
COMMD5-207ENST00000543949 USP31Q70CQ4 1352 aa28.5■■■□□ 2.15
COMMD5-207ENST00000543949 NPHP3Q7Z494 1330 aa28.49■■■□□ 2.15
COMMD5-207ENST00000543949 YTHDC1Q96MU7 727 aaKnown RBP28.49■■■□□ 2.15
COMMD5-207ENST00000543949 KRT28Q7Z3Y7 464 aa28.48■■■□□ 2.15
COMMD5-207ENST00000543949 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
COMMD5-207ENST00000543949 BRINP3Q76B58 766 aa28.47■■■□□ 2.15
COMMD5-207ENST00000543949 ABTB2Q8N961 1025 aa28.46■■■□□ 2.15
COMMD5-207ENST00000543949 PNISRQ8TF01 805 aaKnown RBP28.46■■■□□ 2.15
COMMD5-207ENST00000543949 MAP2P11137 1827 aaKnown RBP28.46■■■□□ 2.15
COMMD5-207ENST00000543949 AATKQ6ZMQ8 1374 aa28.46■■■□□ 2.15
COMMD5-207ENST00000543949 MTHFSP49914 203 aa28.45■■■□□ 2.15
COMMD5-207ENST00000543949 NLRP6P59044 892 aa28.45■■■□□ 2.14
COMMD5-207ENST00000543949 CFAP53Q96M91 514 aa28.45■■■□□ 2.14
COMMD5-207ENST00000543949 MARF1Q9Y4F3 1742 aaKnown RBP28.44■■■□□ 2.14
COMMD5-207ENST00000543949 XPCQ01831 940 aaPredicted RBP28.44■■■□□ 2.14
COMMD5-207ENST00000543949 ALS2Q96Q42 1657 aa28.41■■■□□ 2.14
COMMD5-207ENST00000543949 SBNO1A3KN83 1393 aa28.4■■■□□ 2.14
COMMD5-207ENST00000543949 PXDNQ92626 1479 aa28.4■■■□□ 2.14
COMMD5-207ENST00000543949 SMG6Q86US8 1419 aaKnown RBP28.39■■■□□ 2.13
COMMD5-207ENST00000543949 NHSL1Q5SYE7 1610 aa28.39■■■□□ 2.13
COMMD5-207ENST00000543949 WDR43Q15061 677 aaKnown RBP eCLIP28.37■■■□□ 2.13
COMMD5-207ENST00000543949 NUTM2GQ5VZR2 741 aa28.37■■■□□ 2.13
COMMD5-207ENST00000543949 DDX17Q92841 729 aaKnown RBP28.37■■■□□ 2.13
COMMD5-207ENST00000543949 POLKQ9UBT6 870 aa28.37■■■□□ 2.13
COMMD5-207ENST00000543949 SHPRHQ149N8 1683 aa28.35■■■□□ 2.13
COMMD5-207ENST00000543949 ROBO1Q9Y6N7 1651 aa28.35■■■□□ 2.13
COMMD5-207ENST00000543949 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
COMMD5-207ENST00000543949 LMOD2Q6P5Q4 547 aa28.35■■■□□ 2.13
COMMD5-207ENST00000543949 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
COMMD5-207ENST00000543949 CDK12Q9NYV4 1490 aaPredicted RBP28.35■■■□□ 2.13
COMMD5-207ENST00000543949 FBLN1P23142 703 aa28.34■■■□□ 2.13
COMMD5-207ENST00000543949 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.12
COMMD5-207ENST00000543949 PNPLA6Q8IY17 1366 aa28.32■■■□□ 2.12
COMMD5-207ENST00000543949 PPM1GO15355 546 aaPredicted RBP28.32■■■□□ 2.12
COMMD5-207ENST00000543949 RRS1Q15050 365 aaKnown RBP28.32■■■□□ 2.12
COMMD5-207ENST00000543949 INSRP06213 1382 aa28.31■■■□□ 2.12
COMMD5-207ENST00000543949 COL3A1P02461 1466 aaPredicted RBP28.31■■■□□ 2.12
COMMD5-207ENST00000543949 SOX12O15370 315 aa28.31■■■□□ 2.12
COMMD5-207ENST00000543949 SOS2Q07890 1332 aaPredicted RBP28.31■■■□□ 2.12
COMMD5-207ENST00000543949 SLIT3O75094 1523 aa28.3■■■□□ 2.12
COMMD5-207ENST00000543949 TOM1O60784 492 aa28.3■■■□□ 2.12
COMMD5-207ENST00000543949 KCNH5Q8NCM2 988 aa28.3■■■□□ 2.12
COMMD5-207ENST00000543949 SPATA31A3Q5VYP0 1347 aa28.3■■■□□ 2.12
COMMD5-207ENST00000543949 ARHGEF10O15013 1369 aa28.3■■■□□ 2.12
COMMD5-207ENST00000543949 USP19O94966 1318 aa28.28■■■□□ 2.12
COMMD5-207ENST00000543949 NUDCQ9Y266 331 aa28.28■■■□□ 2.12
COMMD5-207ENST00000543949 NFAT5O94916 1531 aa28.27■■■□□ 2.12
COMMD5-207ENST00000543949 HNRNPUQ00839 825 aaKnown RBP eCLIP28.27■■■□□ 2.12
COMMD5-207ENST00000543949 ADAMTS8Q9UP79 889 aa28.27■■■□□ 2.12
COMMD5-207ENST00000543949 LTN1O94822 1766 aa28.27■■■□□ 2.12
COMMD5-207ENST00000543949 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
COMMD5-207ENST00000543949 DIAPH1O60610 1272 aaKnown RBP28.26■■■□□ 2.11
COMMD5-207ENST00000543949 AHDC1Q5TGY3 1603 aaPredicted RBP28.26■■■□□ 2.11
COMMD5-207ENST00000543949 MAP3K19Q56UN5 1328 aa28.25■■■□□ 2.11
COMMD5-207ENST00000543949 KIF24Q5T7B8 1368 aa28.25■■■□□ 2.11
COMMD5-207ENST00000543949 BLMP54132 1417 aaPredicted RBP28.24■■■□□ 2.11
COMMD5-207ENST00000543949 PHRF1Q9P1Y6 1649 aaKnown RBP28.24■■■□□ 2.11
COMMD5-207ENST00000543949 MED1Q15648 1581 aaPredicted RBP28.24■■■□□ 2.11
COMMD5-207ENST00000543949 FLT4P35916 1363 aa28.23■■■□□ 2.11
COMMD5-207ENST00000543949 GCP02774 474 aa28.21■■■□□ 2.11
COMMD5-207ENST00000543949 AMPHP49418 695 aa28.21■■■□□ 2.11
COMMD5-207ENST00000543949 CRYBG1Q9Y4K1 1723 aa28.21■■■□□ 2.11
COMMD5-207ENST00000543949 RTL1A6NKG5 1358 aa28.2■■■□□ 2.11
COMMD5-207ENST00000543949 CERKQ8TCT0 537 aa28.2■■■□□ 2.1
COMMD5-207ENST00000543949 UBAP1LF5GYI3 381 aa28.19■■■□□ 2.1
COMMD5-207ENST00000543949 CENPBP07199 599 aaPredicted RBP28.19■■■□□ 2.1
COMMD5-207ENST00000543949 U2SURPO15042 1029 aaKnown RBP28.18■■■□□ 2.1
COMMD5-207ENST00000543949 PLEKHG5O94827 1062 aa28.17■■■□□ 2.1
COMMD5-207ENST00000543949 U2AF1L5P0DN76 240 aaPredicted RBP28.17■■■□□ 2.1
COMMD5-207ENST00000543949 U2AF1Q01081 240 aaKnown RBP eCLIP28.17■■■□□ 2.1
COMMD5-207ENST00000543949 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
COMMD5-207ENST00000543949 IL13P35225 146 aa28.15■■■□□ 2.1
COMMD5-207ENST00000543949 PIP4K2BP78356 416 aa28.15■■■□□ 2.1
COMMD5-207ENST00000543949 HOXC9P31274 260 aa28.14■■■□□ 2.1
COMMD5-207ENST00000543949 HSP90AB2PQ58FF8 381 aa28.14■■■□□ 2.1
COMMD5-207ENST00000543949 LRRC59Q96AG4 307 aaKnown RBP28.14■■■□□ 2.1
COMMD5-207ENST00000543949 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms