RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KIF14Q15058 1648 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 CENPQQ7L2Z9 268 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 FANCAO15360 1455 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 FBXO31Q5XUX0 539 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 SYAP1Q96A49 352 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 TCEAL9Q9UHQ7 104 aa8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 FAM184AQ8NB25 1140 aa8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 BBXQ8WY36 941 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 PNISRQ8TF01 805 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-206ENST00000543397 HMGB1P1B2RPK0 211 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 KIAA2012Q0VF49 1180 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 ERC2O15083 957 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 H3BQV1 296 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 ADAMTS2O95450 1211 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 L1TD1Q5T7N2 865 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 IFFO2Q5TF58 517 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 ADAMTS8Q9UP79 889 aa8.42□□□□□ -1.06
SRGAP1-206ENST00000543397 REC8O95072 547 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 IDI1Q13907 227 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 WAPLQ7Z5K2 1190 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 GPATCH11Q8N954 259 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 CRBNQ96SW2 442 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 FOXO3O43524 673 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 KRI1Q8N9T8 703 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 CAMSAP2Q08AD1 1489 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 GNAI3P08754 354 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 TPM4P67936 248 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 ZNF428Q96B54 188 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 NGLY1Q96IV0 654 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 PHF8Q9UPP1 1060 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 BRD4O60885 1362 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
SRGAP1-206ENST00000543397 CPLX1O14810 134 aa8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 ERICH2A1L162 156 aa8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 RRS1Q15050 365 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 WASHC4Q2M389 1173 aa8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
SRGAP1-206ENST00000543397 EXOC6Q8TAG9 804 aa8.4□□□□□ -1.07
SRGAP1-206ENST00000543397 TWISTNBQ3B726 338 aaPredicted RBP8.4□□□□□ -1.07
SRGAP1-206ENST00000543397 NBPF8Q3BBV2 869 aa8.4□□□□□ -1.07
SRGAP1-206ENST00000543397 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.07
SRGAP1-206ENST00000543397 TRIM29Q14134 588 aa8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 CNPY4Q8N129 248 aa8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 KDM4AO75164 1064 aa8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 CLASRPQ8N2M8 674 aaKnown RBP8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
SRGAP1-206ENST00000543397 FOSBP53539 338 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 ANO2Q9NQ90 1003 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 FYB1O15117 783 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 PCF11O94913 1555 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 RALYLQ86SE5 291 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 CREBRFQ8IUR6 639 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 CNNM1Q9NRU3 951 aa8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 LRPPRCP42704 1394 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 SURF6O75683 361 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-206ENST00000543397 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 TOM1O60784 492 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 EXOSC9Q06265 439 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 MCTP1Q6DN14 999 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 TNRQ92752 1358 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 DHX29Q7Z478 1369 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 NAIPQ13075 1403 aa8.37□□□□□ -1.07
SRGAP1-206ENST00000543397 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 SLC4A2P04920 1241 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 ABCC5O15440 1437 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 MYL6BP14649 208 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 AAMPQ13685 434 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 STARD3NLO95772 234 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 MPHOSPH8Q99549 860 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 ANAPC15P60006 121 aa8.36□□□□□ -1.07
SRGAP1-206ENST00000543397 WASLO00401 505 aaPredicted RBP8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 MSNP26038 577 aaKnown RBP8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 TMOD3Q9NYL9 352 aa8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 CCDC43Q96MW1 224 aaKnown RBP8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 FSD1Q9BTV5 496 aa8.35□□□□□ -1.07
SRGAP1-206ENST00000543397 MSH6P52701 1360 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms