RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 MON2Q7Z3U7 1717 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 EDC4Q6P2E9 1401 aaKnown RBP8.07□□□□□ -1.12
ABCF1-207ENST00000542772 PIP4K2BP78356 416 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 AMER1Q5JTC6 1135 aaPredicted RBP8.07□□□□□ -1.12
ABCF1-207ENST00000542772 FBXO41Q8TF61 875 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 PXDNQ92626 1479 aa8.06□□□□□ -1.12
ABCF1-207ENST00000542772 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
ABCF1-207ENST00000542772 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
ABCF1-207ENST00000542772 ABTB2Q8N961 1025 aa8.05□□□□□ -1.12
ABCF1-207ENST00000542772 CGNL1Q0VF96 1302 aa8.04□□□□□ -1.12
ABCF1-207ENST00000542772 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
ABCF1-207ENST00000542772 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
ABCF1-207ENST00000542772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.04□□□□□ -1.12
ABCF1-207ENST00000542772 NRKQ7Z2Y5 1582 aa8.04□□□□□ -1.12
ABCF1-207ENST00000542772 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
ABCF1-207ENST00000542772 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
ABCF1-207ENST00000542772 USP54Q70EL1 1684 aa8.03□□□□□ -1.12
ABCF1-207ENST00000542772 NSD2O96028 1365 aa8.03□□□□□ -1.12
ABCF1-207ENST00000542772 PAK3O75914 559 aaPredicted RBP8.03□□□□□ -1.12
ABCF1-207ENST00000542772 NLRP6P59044 892 aa8.03□□□□□ -1.12
ABCF1-207ENST00000542772 NME9Q86XW9 330 aa8.03□□□□□ -1.12
ABCF1-207ENST00000542772 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
ABCF1-207ENST00000542772 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
ABCF1-207ENST00000542772 ARHGEF10O15013 1369 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 HSPA1LP34931 641 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 GGNBP2Q9H3C7 697 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 ZRANB1Q9UGI0 708 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 PHLPP1O60346 1717 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 TNS3Q68CZ2 1445 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 USP19O94966 1318 aa8.02□□□□□ -1.13
ABCF1-207ENST00000542772 GCP02774 474 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 KCNH5Q8NCM2 988 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 COG3Q96JB2 828 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 PRKRIP1Q9H875 184 aaPredicted RBP8.01□□□□□ -1.13
ABCF1-207ENST00000542772 OVOS2A0A0J9YW53 1432 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 OVOS2Q6IE36 1432 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 PIK3C2AO00443 1686 aa8.01□□□□□ -1.13
ABCF1-207ENST00000542772 MARF1Q9Y4F3 1742 aaKnown RBP8□□□□□ -1.13
ABCF1-207ENST00000542772 COL22A1Q8NFW1 1626 aaPredicted RBP8□□□□□ -1.13
ABCF1-207ENST00000542772 AATKQ6ZMQ8 1374 aa8□□□□□ -1.13
ABCF1-207ENST00000542772 PNPLA6Q8IY17 1366 aa8□□□□□ -1.13
ABCF1-207ENST00000542772 RALBP1Q15311 655 aa8□□□□□ -1.13
ABCF1-207ENST00000542772 MORC1Q86VD1 984 aa8□□□□□ -1.13
ABCF1-207ENST00000542772 PARD3Q8TEW0 1356 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 JCADQ9P266 1359 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 MED1Q15648 1581 aaPredicted RBP7.99□□□□□ -1.13
ABCF1-207ENST00000542772 CC2D1BQ5T0F9 858 aaKnown RBP7.99□□□□□ -1.13
ABCF1-207ENST00000542772 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
ABCF1-207ENST00000542772 ARHGEF25Q86VW2 580 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 POLKQ9UBT6 870 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 ANKRD26Q9UPS8 1709 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 CRYBG1Q9Y4K1 1723 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 SPATA31A6Q5VVP1 1343 aa7.99□□□□□ -1.13
ABCF1-207ENST00000542772 SHPRHQ149N8 1683 aa7.98□□□□□ -1.13
ABCF1-207ENST00000542772 SLIT3O75094 1523 aa7.98□□□□□ -1.13
ABCF1-207ENST00000542772 FBLN1P23142 703 aa7.98□□□□□ -1.13
ABCF1-207ENST00000542772 LMOD2Q6P5Q4 547 aa7.98□□□□□ -1.13
ABCF1-207ENST00000542772 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
ABCF1-207ENST00000542772 MAP2P11137 1827 aaKnown RBP7.98□□□□□ -1.13
ABCF1-207ENST00000542772 INSRP06213 1382 aa7.97□□□□□ -1.13
ABCF1-207ENST00000542772 PPP2R1AP30153 589 aa7.97□□□□□ -1.13
ABCF1-207ENST00000542772 CPDO75976 1380 aa7.97□□□□□ -1.13
ABCF1-207ENST00000542772 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
ABCF1-207ENST00000542772 FAM83GA6ND36 823 aa7.96□□□□□ -1.14
ABCF1-207ENST00000542772 ANP32CO43423 234 aa7.96□□□□□ -1.14
ABCF1-207ENST00000542772 IP6K1Q92551 441 aa7.96□□□□□ -1.14
ABCF1-207ENST00000542772 NFAT5O94916 1531 aa7.96□□□□□ -1.14
ABCF1-207ENST00000542772 MTHFSP49914 203 aa7.95□□□□□ -1.14
ABCF1-207ENST00000542772 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
ABCF1-207ENST00000542772 MAP3K19Q56UN5 1328 aa7.95□□□□□ -1.14
ABCF1-207ENST00000542772 MYBBP1AQ9BQG0 1328 aaKnown RBP7.95□□□□□ -1.14
ABCF1-207ENST00000542772 PHRF1Q9P1Y6 1649 aaKnown RBP7.95□□□□□ -1.14
ABCF1-207ENST00000542772 COL18A1P39060 1754 aa7.94□□□□□ -1.14
ABCF1-207ENST00000542772 RRS1Q15050 365 aaKnown RBP7.94□□□□□ -1.14
ABCF1-207ENST00000542772 ILDR1Q86SU0 546 aaPredicted RBP7.94□□□□□ -1.14
ABCF1-207ENST00000542772 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
ABCF1-207ENST00000542772 AXIN2Q9Y2T1 843 aa7.94□□□□□ -1.14
ABCF1-207ENST00000542772 SMG6Q86US8 1419 aaKnown RBP7.94□□□□□ -1.14
ABCF1-207ENST00000542772 ABCA3Q99758 1704 aa7.93□□□□□ -1.14
ABCF1-207ENST00000542772 HOXC9P31274 260 aa7.93□□□□□ -1.14
ABCF1-207ENST00000542772 TNNT2P45379 298 aaPredicted RBP7.93□□□□□ -1.14
ABCF1-207ENST00000542772 HSP90AB2PQ58FF8 381 aa7.93□□□□□ -1.14
ABCF1-207ENST00000542772 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
ABCF1-207ENST00000542772 KIAA0232Q92628 1395 aa7.93□□□□□ -1.14
ABCF1-207ENST00000542772 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
ABCF1-207ENST00000542772 CNGB1Q14028 1251 aaPredicted RBP7.92□□□□□ -1.14
ABCF1-207ENST00000542772 MIER1Q8N108 512 aa7.92□□□□□ -1.14
ABCF1-207ENST00000542772 ABCC6O95255 1503 aa7.92□□□□□ -1.14
ABCF1-207ENST00000542772 LTN1O94822 1766 aa7.92□□□□□ -1.14
ABCF1-207ENST00000542772 NUTM2BA6NNL0 878 aaPredicted RBP7.91□□□□□ -1.14
ABCF1-207ENST00000542772 NUTM2EB1AL46 878 aaPredicted RBP7.91□□□□□ -1.14
ABCF1-207ENST00000542772 SOX12O15370 315 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 IL13P35225 146 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 AMPHP49418 695 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 HAP1P54257 671 aaPredicted RBP7.91□□□□□ -1.14
ABCF1-207ENST00000542772 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 CCDC184Q52MB2 194 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms