RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FYB1O15117 783 aa19.81■□□□□ 0.76
VARS2-212ENST00000542001 RTEL1-TNFRSF6BF6WH68 1400 aa19.8■□□□□ 0.76
VARS2-212ENST00000542001 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
VARS2-212ENST00000542001 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
VARS2-212ENST00000542001 DNMT1P26358 1616 aaKnown RBP19.79■□□□□ 0.76
VARS2-212ENST00000542001 IL1RAPL2Q9NP60 686 aa19.79■□□□□ 0.76
VARS2-212ENST00000542001 CDC45O75419 566 aa19.79■□□□□ 0.76
VARS2-212ENST00000542001 NEK4P51957 841 aa19.79■□□□□ 0.76
VARS2-212ENST00000542001 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
VARS2-212ENST00000542001 NFE2L2Q16236 605 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 SURF6O75683 361 aaKnown RBP19.78■□□□□ 0.76
VARS2-212ENST00000542001 FCHSD2O94868 740 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 TSHZ3Q63HK5 1081 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 DRC7Q8IY82 874 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
VARS2-212ENST00000542001 PLCH2O75038 1416 aa19.77■□□□□ 0.76
VARS2-212ENST00000542001 REC8O95072 547 aa19.76■□□□□ 0.75
VARS2-212ENST00000542001 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
VARS2-212ENST00000542001 FOSBP53539 338 aa19.76■□□□□ 0.75
VARS2-212ENST00000542001 EIF4G3O43432 1585 aaKnown RBP19.75■□□□□ 0.75
VARS2-212ENST00000542001 C1orf141Q5JVX7 400 aa19.75■□□□□ 0.75
VARS2-212ENST00000542001 CAVIN1Q6NZI2 390 aaKnown RBP19.75■□□□□ 0.75
VARS2-212ENST00000542001 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
VARS2-212ENST00000542001 HSP90B1P14625 803 aaKnown RBP19.74■□□□□ 0.75
VARS2-212ENST00000542001 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
VARS2-212ENST00000542001 AEBP1Q8IUX7 1158 aa19.74■□□□□ 0.75
VARS2-212ENST00000542001 KDM5BQ9UGL1 1544 aa19.73■□□□□ 0.75
VARS2-212ENST00000542001 MCM4P33991 863 aa19.73■□□□□ 0.75
VARS2-212ENST00000542001 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
VARS2-212ENST00000542001 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
VARS2-212ENST00000542001 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
VARS2-212ENST00000542001 UBTFL1P0CB47 393 aaPredicted RBP19.73■□□□□ 0.75
VARS2-212ENST00000542001 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
VARS2-212ENST00000542001 GORABQ5T7V8 394 aa19.72■□□□□ 0.75
VARS2-212ENST00000542001 DDX54Q8TDD1 881 aaKnown RBP19.72■□□□□ 0.75
VARS2-212ENST00000542001 PRPF40AO75400 957 aaKnown RBP19.72■□□□□ 0.75
VARS2-212ENST00000542001 ESCO1Q5FWF5 840 aa19.72■□□□□ 0.75
VARS2-212ENST00000542001 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
VARS2-212ENST00000542001 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
VARS2-212ENST00000542001 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
VARS2-212ENST00000542001 HDGFL1Q5TGJ6 251 aa19.71■□□□□ 0.75
VARS2-212ENST00000542001 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
VARS2-212ENST00000542001 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
VARS2-212ENST00000542001 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
VARS2-212ENST00000542001 VPS37CA5D8V6 355 aaPredicted RBP19.7■□□□□ 0.74
VARS2-212ENST00000542001 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
VARS2-212ENST00000542001 HSP90AB2PQ58FF8 381 aa19.7■□□□□ 0.74
VARS2-212ENST00000542001 MBIPQ9NS73 344 aa19.69■□□□□ 0.74
VARS2-212ENST00000542001 AAMPQ13685 434 aa19.69■□□□□ 0.74
VARS2-212ENST00000542001 GCC1Q96CN9 775 aa19.69■□□□□ 0.74
VARS2-212ENST00000542001 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
VARS2-212ENST00000542001 IFIT2P09913 472 aaKnown RBP19.68■□□□□ 0.74
VARS2-212ENST00000542001 ASXL1Q8IXJ9 1541 aa19.68■□□□□ 0.74
VARS2-212ENST00000542001 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
VARS2-212ENST00000542001 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
VARS2-212ENST00000542001 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
VARS2-212ENST00000542001 SIL1Q9H173 461 aa19.68■□□□□ 0.74
VARS2-212ENST00000542001 ANXA1P04083 346 aa19.67■□□□□ 0.74
VARS2-212ENST00000542001 COL17A1Q9UMD9 1497 aaPredicted RBP19.67■□□□□ 0.74
VARS2-212ENST00000542001 ITSN2Q9NZM3 1697 aa19.67■□□□□ 0.74
VARS2-212ENST00000542001 GPATCH3Q96I76 525 aa19.66■□□□□ 0.74
VARS2-212ENST00000542001 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
VARS2-212ENST00000542001 NPHP1O15259 732 aa19.66■□□□□ 0.74
VARS2-212ENST00000542001 TAF7LQ5H9L4 462 aa19.66■□□□□ 0.74
VARS2-212ENST00000542001 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
VARS2-212ENST00000542001 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
VARS2-212ENST00000542001 NUP160Q12769 1436 aa19.65■□□□□ 0.74
VARS2-212ENST00000542001 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
VARS2-212ENST00000542001 GNAI2P04899 355 aa19.64■□□□□ 0.74
VARS2-212ENST00000542001 POLKQ9UBT6 870 aa19.64■□□□□ 0.74
VARS2-212ENST00000542001 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
VARS2-212ENST00000542001 ASXL2Q76L83 1435 aa19.64■□□□□ 0.73
VARS2-212ENST00000542001 CEP170Q5SW79 1584 aa19.64■□□□□ 0.73
VARS2-212ENST00000542001 TULP1O00294 542 aaPredicted RBP19.64■□□□□ 0.73
VARS2-212ENST00000542001 K7ELQ4 463 aaPredicted RBP19.63■□□□□ 0.73
VARS2-212ENST00000542001 TBC1D32Q96NH3 1257 aa19.63■□□□□ 0.73
VARS2-212ENST00000542001 KDM4AO75164 1064 aa19.63■□□□□ 0.73
VARS2-212ENST00000542001 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
VARS2-212ENST00000542001 DUOX2Q9NRD8 1548 aa19.62■□□□□ 0.73
VARS2-212ENST00000542001 FOXO3O43524 673 aa19.62■□□□□ 0.73
VARS2-212ENST00000542001 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
VARS2-212ENST00000542001 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
VARS2-212ENST00000542001 SSFA2P28290 1259 aa19.62■□□□□ 0.73
VARS2-212ENST00000542001 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
VARS2-212ENST00000542001 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
VARS2-212ENST00000542001 TBC1D9Q6ZT07 1266 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 MAGI2Q86UL8 1455 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 NASPP49321 788 aaPredicted RBP19.61■□□□□ 0.73
VARS2-212ENST00000542001 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
VARS2-212ENST00000542001 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
VARS2-212ENST00000542001 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 MYL6BP14649 208 aa19.61■□□□□ 0.73
VARS2-212ENST00000542001 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.731e-6■■□□□ 13
VARS2-212ENST00000542001 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms