RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
PRICKLE3-205ENST00000540849 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.3
PRICKLE3-205ENST00000540849 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.3
PRICKLE3-205ENST00000540849 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.3
PRICKLE3-205ENST00000540849 MED14O60244 1454 aa16.95■□□□□ 0.3
PRICKLE3-205ENST00000540849 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
PRICKLE3-205ENST00000540849 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
PRICKLE3-205ENST00000540849 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 BECN1Q14457 450 aa16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
PRICKLE3-205ENST00000540849 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
PRICKLE3-205ENST00000540849 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
PRICKLE3-205ENST00000540849 YEATS2Q9ULM3 1422 aa16.93■□□□□ 0.3
PRICKLE3-205ENST00000540849 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
PRICKLE3-205ENST00000540849 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
PRICKLE3-205ENST00000540849 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
PRICKLE3-205ENST00000540849 FYB1O15117 783 aa16.92■□□□□ 0.3
PRICKLE3-205ENST00000540849 TRIM27P14373 513 aa16.92■□□□□ 0.3
PRICKLE3-205ENST00000540849 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
PRICKLE3-205ENST00000540849 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
PRICKLE3-205ENST00000540849 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
PRICKLE3-205ENST00000540849 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
PRICKLE3-205ENST00000540849 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
PRICKLE3-205ENST00000540849 IL16Q14005 1332 aa16.9■□□□□ 0.3
PRICKLE3-205ENST00000540849 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
PRICKLE3-205ENST00000540849 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
PRICKLE3-205ENST00000540849 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 PNPLA6Q8IY17 1366 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 ATF7IPQ6VMQ6 1270 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 TBC1D2Q9BYX2 928 aa16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
PRICKLE3-205ENST00000540849 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
PRICKLE3-205ENST00000540849 RIPK4P57078 832 aa16.87■□□□□ 0.29
PRICKLE3-205ENST00000540849 POGKQ9P215 609 aa16.87■□□□□ 0.29
PRICKLE3-205ENST00000540849 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
PRICKLE3-205ENST00000540849 DIAPH1O60610 1272 aaKnown RBP16.86■□□□□ 0.29
PRICKLE3-205ENST00000540849 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
PRICKLE3-205ENST00000540849 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
PRICKLE3-205ENST00000540849 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
PRICKLE3-205ENST00000540849 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
PRICKLE3-205ENST00000540849 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.29
PRICKLE3-205ENST00000540849 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
PRICKLE3-205ENST00000540849 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
PRICKLE3-205ENST00000540849 FBXO31Q5XUX0 539 aaPredicted RBP16.82■□□□□ 0.28
PRICKLE3-205ENST00000540849 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
PRICKLE3-205ENST00000540849 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
PRICKLE3-205ENST00000540849 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
PRICKLE3-205ENST00000540849 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
PRICKLE3-205ENST00000540849 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
PRICKLE3-205ENST00000540849 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
PRICKLE3-205ENST00000540849 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
PRICKLE3-205ENST00000540849 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
PRICKLE3-205ENST00000540849 ATP7BP35670 1465 aa16.79■□□□□ 0.28
PRICKLE3-205ENST00000540849 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
PRICKLE3-205ENST00000540849 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
PRICKLE3-205ENST00000540849 FCHSD2O94868 740 aa16.78■□□□□ 0.28
PRICKLE3-205ENST00000540849 FBLN1P23142 703 aa16.78■□□□□ 0.28
PRICKLE3-205ENST00000540849 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
PRICKLE3-205ENST00000540849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRICKLE3-205ENST00000540849 SPRYD3Q8NCJ5 442 aa16.77■□□□□ 0.28
PRICKLE3-205ENST00000540849 POLKQ9UBT6 870 aa16.77■□□□□ 0.28
PRICKLE3-205ENST00000540849 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
PRICKLE3-205ENST00000540849 NUCB1Q02818 461 aa16.76■□□□□ 0.27
PRICKLE3-205ENST00000540849 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
PRICKLE3-205ENST00000540849 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
PRICKLE3-205ENST00000540849 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
PRICKLE3-205ENST00000540849 HMOX1P09601 288 aa16.73■□□□□ 0.27
PRICKLE3-205ENST00000540849 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
PRICKLE3-205ENST00000540849 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
PRICKLE3-205ENST00000540849 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
PRICKLE3-205ENST00000540849 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
PRICKLE3-205ENST00000540849 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 VAMP4O75379 141 aa16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 CHD1LQ86WJ1 897 aa16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
PRICKLE3-205ENST00000540849 SPATA31D1Q6ZQQ2 1576 aa16.71■□□□□ 0.27
PRICKLE3-205ENST00000540849 NRXN3Q9Y4C0 1643 aa16.71■□□□□ 0.27
PRICKLE3-205ENST00000540849 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
PRICKLE3-205ENST00000540849 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
PRICKLE3-205ENST00000540849 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 MCM4P33991 863 aa16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
PRICKLE3-205ENST00000540849 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms