RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SPHKAP	Q2M3C7	1700 aa		7.29	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	PMFBP1	Q8TBY8	1022 aa		7.29	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	C8orf34	Q49A92	452 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	NKTR	P30414	1462 aa	Known RBP	7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	SLIT1	O75093	1534 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	DIP2A	Q14689	1571 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	FAM161A	Q3B820	660 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	ADAMTS8	Q9UP79	889 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	ARHGAP23	Q9P227	1491 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	RALGAPB	Q86X10	1494 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	HMGB2	P26583	209 aa	Known RBP	7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	UBE2Q2	Q8WVN8	375 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	PANK3	Q9H999	370 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	C3	P01024	1663 aa		7.28	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.27	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	NUTM2E	B1AL46	878 aa	Predicted RBP	7.27	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	SOX12	O15370	315 aa		7.27	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	FOXO3	O43524	673 aa		7.27	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.27	□□□□□ -1.24
RAPGEF4-215	ENST00000540783	PRDM11	Q9NQV5	511 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	CABP1	Q9NZU7	370 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783		E9PCH4	1651 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	TTC21A	Q8NDW8	1320 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PER1	O15534	1290 aa	Predicted RBP	7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	RBM33	Q96EV2	1170 aa	Known RBP	7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SLK	Q9H2G2	1235 aa	Predicted RBP	7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PIK3C2B	O00750	1634 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	MROH1	Q8NDA8	1641 aa		7.27	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PIK3C2G	O75747	1445 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	MET	P08581	1390 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	MYO3A	Q8NEV4	1616 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	KDM2B	Q8NHM5	1336 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	CLTCL1	P53675	1640 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ARHGEF10	O15013	1369 aa		7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.26	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	NGLY1	Q96IV0	654 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ADGRL3	Q9HAR2	1447 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	NEURL4	Q96JN8	1562 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PTCH1	Q13635	1447 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	CCDC146	Q8IYE0	955 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PARD3	Q8TEW0	1356 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	MED14	O60244	1454 aa		7.25	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SEC24B	O95487	1268 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	MAPK8IP3	Q9UPT6	1336 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SPRYD3	Q8NCJ5	442 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	BCAR3	O75815	825 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	DUSP27	Q5VZP5	1158 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ANKAR	Q7Z5J8	1434 aa		7.24	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SBNO2	Q9Y2G9	1366 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	DCC	P43146	1447 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ACE	P12821	1306 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	LAMC1	P11047	1609 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PLEKHH1	Q9ULM0	1364 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	IGHD	P01880	384 aa		7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	TNNT2	P45379	298 aa	Predicted RBP	7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SPINK5	Q9NQ38	1064 aa	Predicted RBP	7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.23	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ADAMTS13	Q76LX8	1427 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	FAM43A	Q8N2R8	423 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ALK	Q9UM73	1620 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PLEKHG3	A1L390	1219 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	GOLGA2	Q08379	1002 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SF3B2	Q13435	895 aa	Known RBP	7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	SLC12A5	Q9H2X9	1139 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	IQSEC2	Q5JU85	1478 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	POLR1A	O95602	1720 aa	Predicted RBP	7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	ROBO2	Q9HCK4	1378 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	XPC	Q01831	940 aa	Predicted RBP	7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	CHMP4A	Q9BY43	222 aa		7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	GZF1	Q9H116	711 aa	Predicted RBP	7.22	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	U2SURP	O15042	1029 aa	Known RBP	7.21	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	RAPGEF4	Q8WZA2	1011 aa		7.21	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	RSPH6A	Q9H0K4	717 aa		7.21	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	PPIP5K1	Q6PFW1	1433 aa		7.21	□□□□□ -1.25
RAPGEF4-215	ENST00000540783	NEXMIF	Q5QGS0	1516 aa		7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TMEM131L	A2VDJ0	1609 aa		7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ADAMTS2	O95450	1211 aa		7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NSD2	O96028	1365 aa		7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	KDM5A	P29375	1690 aa	Known RBP	7.21	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TESK2	Q96S53	571 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NLRP2	Q9NX02	1062 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NUTM2G	Q5VZR2	741 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	JCAD	Q9P266	1359 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	APAF1	O14727	1248 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	USP19	O94966	1318 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	PPP2R1A	P30153	589 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	LTV1	Q96GA3	475 aa	Predicted RBP	7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	SETBP1	Q9Y6X0	1596 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	DLC1	Q96QB1	1528 aa		7.2	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ZNF772	Q68DY9	489 aa	Predicted RBP	7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	PANK1	Q8TE04	598 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ORAI2	Q96SN7	254 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	COG6	Q9Y2V7	657 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TECPR2	O15040	1411 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TTC21B	Q7Z4L5	1316 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TOM1L2	Q6ZVM7	507 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	RTF1	Q92541	710 aa	Known RBP	7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ANKRD36B	Q8N2N9	1353 aa		7.19	□□□□□ -1.26

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