RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 ITSN1Q15811 1721 aa19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
CYB561A3-216ENST00000540755 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
CYB561A3-216ENST00000540755 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
CYB561A3-216ENST00000540755 ORAI2Q96SN7 254 aa19.32■□□□□ 0.68
CYB561A3-216ENST00000540755 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
CYB561A3-216ENST00000540755 NLRP13Q86W25 1043 aa19.31■□□□□ 0.68
CYB561A3-216ENST00000540755 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
CYB561A3-216ENST00000540755 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
CYB561A3-216ENST00000540755 SOS2Q07890 1332 aaPredicted RBP19.31■□□□□ 0.68
CYB561A3-216ENST00000540755 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 MON2Q7Z3U7 1717 aa19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 NSD2O96028 1365 aa19.3■□□□□ 0.68
CYB561A3-216ENST00000540755 AFF2P51816 1311 aa19.29■□□□□ 0.68
CYB561A3-216ENST00000540755 CGNL1Q0VF96 1302 aa19.29■□□□□ 0.68
CYB561A3-216ENST00000540755 KIF20BQ96Q89 1820 aa19.29■□□□□ 0.68
CYB561A3-216ENST00000540755 CPSF1Q10570 1443 aaKnown RBP19.28■□□□□ 0.68
CYB561A3-216ENST00000540755 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
CYB561A3-216ENST00000540755 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
CYB561A3-216ENST00000540755 PXDNQ92626 1479 aa19.27■□□□□ 0.68
CYB561A3-216ENST00000540755 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.67
CYB561A3-216ENST00000540755 ANKARQ7Z5J8 1434 aa19.27■□□□□ 0.67
CYB561A3-216ENST00000540755 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
CYB561A3-216ENST00000540755 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
CYB561A3-216ENST00000540755 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
CYB561A3-216ENST00000540755 PLEKHG3A1L390 1219 aa19.22■□□□□ 0.67
CYB561A3-216ENST00000540755 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
CYB561A3-216ENST00000540755 NRKQ7Z2Y5 1582 aa19.22■□□□□ 0.67
CYB561A3-216ENST00000540755 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
CYB561A3-216ENST00000540755 RGS12O14924 1447 aa19.21■□□□□ 0.67
CYB561A3-216ENST00000540755 RXRBP28702 533 aa19.21■□□□□ 0.67
CYB561A3-216ENST00000540755 PNISRQ8TF01 805 aaKnown RBP19.21■□□□□ 0.67
CYB561A3-216ENST00000540755 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
CYB561A3-216ENST00000540755 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
CYB561A3-216ENST00000540755 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
CYB561A3-216ENST00000540755 NPHP3Q7Z494 1330 aa19.19■□□□□ 0.66
CYB561A3-216ENST00000540755 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
CYB561A3-216ENST00000540755 KIF1AQ12756 1690 aa19.18■□□□□ 0.66
CYB561A3-216ENST00000540755 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
CYB561A3-216ENST00000540755 FYB1O15117 783 aa19.17■□□□□ 0.66
CYB561A3-216ENST00000540755 ACEP12821 1306 aa19.16■□□□□ 0.66
CYB561A3-216ENST00000540755 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
CYB561A3-216ENST00000540755 XPCQ01831 940 aaPredicted RBP19.16■□□□□ 0.66
CYB561A3-216ENST00000540755 UPF1Q92900 1129 aaKnown RBP eCLIP19.16■□□□□ 0.662e-7■■■■■ 40.3
CYB561A3-216ENST00000540755 FOXO3O43524 673 aa19.16■□□□□ 0.66
CYB561A3-216ENST00000540755 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
CYB561A3-216ENST00000540755 USP6P35125 1406 aa19.15■□□□□ 0.66
CYB561A3-216ENST00000540755 INSRP06213 1382 aa19.14■□□□□ 0.65
CYB561A3-216ENST00000540755 NGLY1Q96IV0 654 aa19.14■□□□□ 0.65
CYB561A3-216ENST00000540755 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
CYB561A3-216ENST00000540755 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
CYB561A3-216ENST00000540755 GGNBP2Q9H3C7 697 aa19.13■□□□□ 0.65
CYB561A3-216ENST00000540755 SSH2Q76I76 1423 aa19.13■□□□□ 0.65
CYB561A3-216ENST00000540755 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
CYB561A3-216ENST00000540755 ATRNO75882 1429 aa19.12■□□□□ 0.65
CYB561A3-216ENST00000540755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
CYB561A3-216ENST00000540755 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
CYB561A3-216ENST00000540755 BCL9LQ86UU0 1499 aa19.1■□□□□ 0.65
CYB561A3-216ENST00000540755 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
CYB561A3-216ENST00000540755 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
CYB561A3-216ENST00000540755 USP21Q9UK80 565 aa19.09■□□□□ 0.65
CYB561A3-216ENST00000540755 NGDNQ8NEJ9 315 aaKnown RBP19.09■□□□□ 0.65
CYB561A3-216ENST00000540755 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
CYB561A3-216ENST00000540755 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.65
CYB561A3-216ENST00000540755 MAP2P11137 1827 aaKnown RBP19.08■□□□□ 0.64
CYB561A3-216ENST00000540755 EP400Q96L91 3159 aa19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 TNNT2P45379 298 aaPredicted RBP19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 NME9Q86XW9 330 aa19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 USP54Q70EL1 1684 aa19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
CYB561A3-216ENST00000540755 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
CYB561A3-216ENST00000540755 TNS3Q68CZ2 1445 aa19.06■□□□□ 0.64
CYB561A3-216ENST00000540755 TRPC5Q9UL62 973 aaPredicted RBP19.06■□□□□ 0.64
CYB561A3-216ENST00000540755 MTHFSP49914 203 aa19.05■□□□□ 0.64
CYB561A3-216ENST00000540755 OVOS2A0A0J9YW53 1432 aa19.05■□□□□ 0.64
CYB561A3-216ENST00000540755 OVOS2Q6IE36 1432 aa19.05■□□□□ 0.64
CYB561A3-216ENST00000540755 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
CYB561A3-216ENST00000540755 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
CYB561A3-216ENST00000540755 SLIT2O94813 1529 aa19.04■□□□□ 0.64
CYB561A3-216ENST00000540755 COG3Q96JB2 828 aa19.04■□□□□ 0.64
CYB561A3-216ENST00000540755 ZBED9Q6R2W3 1325 aa19.04■□□□□ 0.64
CYB561A3-216ENST00000540755 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
CYB561A3-216ENST00000540755 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
CYB561A3-216ENST00000540755 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
CYB561A3-216ENST00000540755 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
CYB561A3-216ENST00000540755 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
CYB561A3-216ENST00000540755 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
CYB561A3-216ENST00000540755 SBNO1A3KN83 1393 aa19.01■□□□□ 0.63
CYB561A3-216ENST00000540755 GLI3P10071 1580 aa19.01■□□□□ 0.63
CYB561A3-216ENST00000540755 COL3A1P02461 1466 aaPredicted RBP19.01■□□□□ 0.63
CYB561A3-216ENST00000540755 ZRANB1Q9UGI0 708 aa19■□□□□ 0.63
CYB561A3-216ENST00000540755 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms