RNA–Protein interactions for RNA: ENST00000540636.5

GBGT1-208, Transcript of globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group), humanhuman

TSL 2 BASIC

Gene GBGT1, Length 1,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBGT1-208ENST00000540636 FRAT1Q92837 279 aaPredicted RBP23.98■■□□□ 1.43
GBGT1-208ENST00000540636 TMPOP42166 694 aaKnown RBP23.97■■□□□ 1.43
GBGT1-208ENST00000540636 PMFBP1Q8TBY8 1022 aa23.97■■□□□ 1.43
GBGT1-208ENST00000540636 U2SURPO15042 1029 aaKnown RBP23.96■■□□□ 1.43
GBGT1-208ENST00000540636 C8orf34Q49A92 452 aa23.96■■□□□ 1.43
GBGT1-208ENST00000540636 CABP1Q9NZU7 370 aa23.96■■□□□ 1.43
GBGT1-208ENST00000540636 DIAPH1O60610 1272 aaKnown RBP23.96■■□□□ 1.43
GBGT1-208ENST00000540636 IGHDP01880 384 aa23.95■■□□□ 1.42
GBGT1-208ENST00000540636 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
GBGT1-208ENST00000540636 RGS3P49796 1198 aa23.93■■□□□ 1.42
GBGT1-208ENST00000540636 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
GBGT1-208ENST00000540636 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
GBGT1-208ENST00000540636 NBR1Q14596 966 aa23.92■■□□□ 1.42
GBGT1-208ENST00000540636 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
GBGT1-208ENST00000540636 FCHSD2O94868 740 aa23.9■■□□□ 1.42
GBGT1-208ENST00000540636 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
GBGT1-208ENST00000540636 TRIM35Q9UPQ4 493 aa23.9■■□□□ 1.42
GBGT1-208ENST00000540636 ZMYM3Q14202 1370 aa23.9■■□□□ 1.42
GBGT1-208ENST00000540636 ZKSCAN2Q63HK3 967 aa23.9■■□□□ 1.42
GBGT1-208ENST00000540636 ESF1Q9H501 851 aaKnown RBP23.89■■□□□ 1.42
GBGT1-208ENST00000540636 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
GBGT1-208ENST00000540636 PPM1GO15355 546 aaPredicted RBP23.88■■□□□ 1.41
GBGT1-208ENST00000540636 VIRMAQ69YN4 1812 aaKnown RBP23.88■■□□□ 1.41
GBGT1-208ENST00000540636 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
GBGT1-208ENST00000540636 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
GBGT1-208ENST00000540636 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
GBGT1-208ENST00000540636 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
GBGT1-208ENST00000540636 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
GBGT1-208ENST00000540636 RLBP1P12271 317 aa23.86■■□□□ 1.41
GBGT1-208ENST00000540636 USP35Q9P2H5 1018 aa23.86■■□□□ 1.41
GBGT1-208ENST00000540636 WASLO00401 505 aaPredicted RBP23.86■■□□□ 1.41
GBGT1-208ENST00000540636 RIPK4P57078 832 aa23.86■■□□□ 1.41
GBGT1-208ENST00000540636 MLECQ14165 292 aa23.86■■□□□ 1.41
GBGT1-208ENST00000540636 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
GBGT1-208ENST00000540636 NEFMP07197 916 aa23.85■■□□□ 1.41
GBGT1-208ENST00000540636 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
GBGT1-208ENST00000540636 RWDD1Q9H446 243 aaPredicted RBP23.85■■□□□ 1.41
GBGT1-208ENST00000540636 TECPR2O15040 1411 aa23.85■■□□□ 1.41
GBGT1-208ENST00000540636 DZIP1LQ8IYY4 767 aaKnown RBP23.84■■□□□ 1.41
GBGT1-208ENST00000540636 EXOSC9Q06265 439 aaKnown RBP23.84■■□□□ 1.41
GBGT1-208ENST00000540636 FTSJ3Q8IY81 847 aaKnown RBP23.83■■□□□ 1.41
GBGT1-208ENST00000540636 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
GBGT1-208ENST00000540636 TSR2Q969E8 191 aaKnown RBP23.82■■□□□ 1.4
GBGT1-208ENST00000540636 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
GBGT1-208ENST00000540636 PCDHB15Q9Y5E8 787 aa23.82■■□□□ 1.4
GBGT1-208ENST00000540636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.82■■□□□ 1.4
GBGT1-208ENST00000540636 SMC4Q9NTJ3 1288 aa23.82■■□□□ 1.4
GBGT1-208ENST00000540636 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
GBGT1-208ENST00000540636 PPIP5K1Q6PFW1 1433 aa23.81■■□□□ 1.4
GBGT1-208ENST00000540636 METP08581 1390 aa23.81■■□□□ 1.4
GBGT1-208ENST00000540636 MAP2P11137 1827 aaKnown RBP23.81■■□□□ 1.4
GBGT1-208ENST00000540636 AATKQ6ZMQ8 1374 aa23.81■■□□□ 1.4
GBGT1-208ENST00000540636 DEKP35659 375 aaKnown RBP23.8■■□□□ 1.4
GBGT1-208ENST00000540636 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
GBGT1-208ENST00000540636 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
GBGT1-208ENST00000540636 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
GBGT1-208ENST00000540636 TNNQ9UQP3 1299 aa23.79■■□□□ 1.4
GBGT1-208ENST00000540636 CPS1P31327 1500 aa23.79■■□□□ 1.4
GBGT1-208ENST00000540636 TNRQ92752 1358 aa23.78■■□□□ 1.4
GBGT1-208ENST00000540636 CALD1Q05682 793 aaKnown RBP23.78■■□□□ 1.4
GBGT1-208ENST00000540636 DDX19BQ9UMR2 479 aa23.78■■□□□ 1.4
GBGT1-208ENST00000540636 CDK12Q9NYV4 1490 aaPredicted RBP23.78■■□□□ 1.4
GBGT1-208ENST00000540636 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
GBGT1-208ENST00000540636 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
GBGT1-208ENST00000540636 ALDH1L2Q3SY69 923 aa23.77■■□□□ 1.4
GBGT1-208ENST00000540636 ATF7IPQ6VMQ6 1270 aa23.77■■□□□ 1.4
GBGT1-208ENST00000540636 SSH1Q8WYL5 1049 aa23.77■■□□□ 1.4
GBGT1-208ENST00000540636 CCDC61Q9Y6R9 512 aa23.77■■□□□ 1.4
GBGT1-208ENST00000540636 NUDT16Q96DE0 195 aaKnown RBP23.76■■□□□ 1.39
GBGT1-208ENST00000540636 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
GBGT1-208ENST00000540636 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
GBGT1-208ENST00000540636 ZNF692Q9BU19 519 aaPredicted RBP23.75■■□□□ 1.39
GBGT1-208ENST00000540636 TRIM27P14373 513 aa23.74■■□□□ 1.39
GBGT1-208ENST00000540636 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
GBGT1-208ENST00000540636 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
GBGT1-208ENST00000540636 TMEM2Q9UHN6 1383 aa23.74■■□□□ 1.39
GBGT1-208ENST00000540636 BRPF1P55201 1214 aaPredicted RBP23.73■■□□□ 1.39
GBGT1-208ENST00000540636 PDZRN3Q9UPQ7 1066 aa23.73■■□□□ 1.39
GBGT1-208ENST00000540636 LAS1LQ9Y4W2 734 aaKnown RBP23.73■■□□□ 1.39
GBGT1-208ENST00000540636 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
GBGT1-208ENST00000540636 COG3Q96JB2 828 aa23.72■■□□□ 1.39
GBGT1-208ENST00000540636 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
GBGT1-208ENST00000540636 IL13P35225 146 aa23.72■■□□□ 1.39
GBGT1-208ENST00000540636 HDAC1Q13547 482 aaPredicted RBP23.72■■□□□ 1.39
GBGT1-208ENST00000540636 ITSN1Q15811 1721 aa23.71■■□□□ 1.39
GBGT1-208ENST00000540636 NOB1Q9ULX3 412 aaKnown RBP23.71■■□□□ 1.39
GBGT1-208ENST00000540636 NME9Q86XW9 330 aa23.7■■□□□ 1.38
GBGT1-208ENST00000540636 C3P01024 1663 aa23.69■■□□□ 1.38
GBGT1-208ENST00000540636 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
GBGT1-208ENST00000540636 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
GBGT1-208ENST00000540636 EMILIN1Q9Y6C2 1016 aa23.68■■□□□ 1.38
GBGT1-208ENST00000540636 USP19O94966 1318 aa23.67■■□□□ 1.38
GBGT1-208ENST00000540636 GNAI1P63096 354 aa23.67■■□□□ 1.38
GBGT1-208ENST00000540636 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
GBGT1-208ENST00000540636 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
GBGT1-208ENST00000540636 FBLN1P23142 703 aa23.66■■□□□ 1.38
GBGT1-208ENST00000540636 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
GBGT1-208ENST00000540636 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
GBGT1-208ENST00000540636 ADAMTS13Q76LX8 1427 aa23.65■■□□□ 1.38
GBGT1-208ENST00000540636 PHACTR3Q96KR7 559 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms