RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
CTNNA1-243ENST00000540387 UBR1Q8IWV7 1749 aa12.01□□□□□ -0.49
CTNNA1-243ENST00000540387 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
CTNNA1-243ENST00000540387 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
CTNNA1-243ENST00000540387 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
CTNNA1-243ENST00000540387 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
CTNNA1-243ENST00000540387 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
CTNNA1-243ENST00000540387 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
CTNNA1-243ENST00000540387 MYO3AQ8NEV4 1616 aa11.99□□□□□ -0.49
CTNNA1-243ENST00000540387 ZSCAN30Q86W11 494 aa11.98□□□□□ -0.49
CTNNA1-243ENST00000540387 STK26Q9P289 416 aa11.98□□□□□ -0.49
CTNNA1-243ENST00000540387 R3HCC1Q9Y3T6 440 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-243ENST00000540387 CEP170BQ9Y4F5 1589 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-243ENST00000540387 SEC24BO95487 1268 aa11.97□□□□□ -0.49
CTNNA1-243ENST00000540387 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
CTNNA1-243ENST00000540387 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-243ENST00000540387 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-243ENST00000540387 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
CTNNA1-243ENST00000540387 UQCRHLA0A096LP55 91 aa11.96□□□□□ -0.49
CTNNA1-243ENST00000540387 UQCRHP07919 91 aa11.96□□□□□ -0.49
CTNNA1-243ENST00000540387 TESK2Q96S53 571 aa11.96□□□□□ -0.49
CTNNA1-243ENST00000540387 SLIT1O75093 1534 aa11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 TNNT2P45379 298 aaPredicted RBP11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 ANP32BQ92688 251 aaKnown RBP11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 ADGRB1O14514 1584 aa11.96□□□□□ -0.5
CTNNA1-243ENST00000540387 POLR3GLQ9BT43 218 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 KIAA1210Q9ULL0 1709 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 GAS2L3Q86XJ1 694 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 ALKQ9UM73 1620 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 PLEKHG1Q9ULL1 1385 aa11.95□□□□□ -0.5
CTNNA1-243ENST00000540387 VGLL3A8MV65 326 aa11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 CCDC94Q9BW85 323 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 METP08581 1390 aa11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 KIF20AO95235 890 aa11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 DYNC1I1O14576 645 aa11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
CTNNA1-243ENST00000540387 SETBP1Q9Y6X0 1596 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 LAMC1P11047 1609 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 ADAMTS13Q76LX8 1427 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 HSPA2P54652 639 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 CCDC173Q0VFZ6 552 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
CTNNA1-243ENST00000540387 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-243ENST00000540387 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
CTNNA1-243ENST00000540387 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-243ENST00000540387 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-243ENST00000540387 CHMP5Q9NZZ3 219 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 NRXN3Q9Y4C0 1643 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 TMF1P82094 1093 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
CTNNA1-243ENST00000540387 DISP3Q9P2K9 1392 aa11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 IQGAP1P46940 1657 aa11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 ZNF142P52746 1687 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-243ENST00000540387 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-243ENST00000540387 MED14O60244 1454 aa11.89□□□□□ -0.51
CTNNA1-243ENST00000540387 ABCC11Q96J66 1382 aa11.88□□□□□ -0.51
CTNNA1-243ENST00000540387 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-243ENST00000540387 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
CTNNA1-243ENST00000540387 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
CTNNA1-243ENST00000540387 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-243ENST00000540387 XPCQ01831 940 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-243ENST00000540387 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
CTNNA1-243ENST00000540387 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CTNNA1-243ENST00000540387 SETD1AO15047 1707 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-243ENST00000540387 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-243ENST00000540387 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-243ENST00000540387 RALBP1Q15311 655 aa11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
CTNNA1-243ENST00000540387 CBX1P83916 185 aa11.84□□□□□ -0.51
CTNNA1-243ENST00000540387 ROBO2Q9HCK4 1378 aa11.84□□□□□ -0.51
CTNNA1-243ENST00000540387 KCNA6P17658 529 aa11.84□□□□□ -0.51
CTNNA1-243ENST00000540387 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
CTNNA1-243ENST00000540387 CDCA8Q53HL2 280 aa11.83□□□□□ -0.51
CTNNA1-243ENST00000540387 TAF3Q5VWG9 929 aa11.83□□□□□ -0.51
CTNNA1-243ENST00000540387 SIRT1Q96EB6 747 aa11.83□□□□□ -0.51
CTNNA1-243ENST00000540387 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.51
CTNNA1-243ENST00000540387 ZBTB22O15209 634 aa11.83□□□□□ -0.52
CTNNA1-243ENST00000540387 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-243ENST00000540387 HS1BP3Q53T59 392 aa11.83□□□□□ -0.52
CTNNA1-243ENST00000540387 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
CTNNA1-243ENST00000540387 MAPK8IP3Q9UPT6 1336 aa11.82□□□□□ -0.52
CTNNA1-243ENST00000540387 ARHGEF28Q8N1W1 1705 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-243ENST00000540387 TECPR2O15040 1411 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms