RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
DNMT1-203ENST00000540357 BMP2KLQ5H9B9 411 aa15.81■□□□□ 0.12
DNMT1-203ENST00000540357 SEC24BO95487 1268 aa15.81■□□□□ 0.12
DNMT1-203ENST00000540357 AFAP1Q8N556 730 aa15.81■□□□□ 0.12
DNMT1-203ENST00000540357 PANK2Q9BZ23 570 aa15.81■□□□□ 0.12
DNMT1-203ENST00000540357 TPM4P67936 248 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 TWISTNBQ3B726 338 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-203ENST00000540357 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-203ENST00000540357 POLR3AO14802 1390 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-203ENST00000540357 ERC2O15083 957 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 TRIM27P14373 513 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 NEK4P51957 841 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 KLHL40Q2TBA0 621 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 ADGBQ8N7X0 1667 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 SOX12O15370 315 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 NPC1L1Q9UHC9 1359 aa15.8■□□□□ 0.12
DNMT1-203ENST00000540357 MCM5P33992 734 aa15.79■□□□□ 0.12
DNMT1-203ENST00000540357 NAP1L2Q9ULW6 460 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-203ENST00000540357 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
DNMT1-203ENST00000540357 ZMYM3Q14202 1370 aa15.79■□□□□ 0.12
DNMT1-203ENST00000540357 HMOX1P09601 288 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 SMC3Q9UQE7 1217 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 SSFA2P28290 1259 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 NSD2O96028 1365 aa15.78■□□□□ 0.12
DNMT1-203ENST00000540357 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-203ENST00000540357 FCHSD2O94868 740 aa15.77■□□□□ 0.12
DNMT1-203ENST00000540357 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-203ENST00000540357 KDM5BQ9UGL1 1544 aa15.77■□□□□ 0.12
DNMT1-203ENST00000540357 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.77■□□□□ 0.11
DNMT1-203ENST00000540357 GOLGA6L19H0YKK7 550 aa15.77■□□□□ 0.11
DNMT1-203ENST00000540357 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
DNMT1-203ENST00000540357 IL16Q14005 1332 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 NUCB1Q02818 461 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 SASS6Q6UVJ0 657 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
DNMT1-203ENST00000540357 BAG4O95429 457 aaKnown RBP15.75■□□□□ 0.11
DNMT1-203ENST00000540357 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
DNMT1-203ENST00000540357 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
DNMT1-203ENST00000540357 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-203ENST00000540357 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-203ENST00000540357 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
DNMT1-203ENST00000540357 DUOX2Q9NRD8 1548 aa15.74■□□□□ 0.11
DNMT1-203ENST00000540357 A2MP01023 1474 aa15.73■□□□□ 0.11
DNMT1-203ENST00000540357 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
DNMT1-203ENST00000540357 TBC1D9Q6ZT07 1266 aa15.73■□□□□ 0.11
DNMT1-203ENST00000540357 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
DNMT1-203ENST00000540357 ATAD2Q6PL18 1390 aa15.73■□□□□ 0.11
DNMT1-203ENST00000540357 SYCE3A1L190 88 aa15.72■□□□□ 0.11
DNMT1-203ENST00000540357 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
DNMT1-203ENST00000540357 BECN2A8MW95 431 aa15.71■□□□□ 0.11
DNMT1-203ENST00000540357 RLBP1P12271 317 aa15.71■□□□□ 0.11
DNMT1-203ENST00000540357 GNAI3P08754 354 aa15.71■□□□□ 0.1
DNMT1-203ENST00000540357 IFT57Q9NWB7 429 aa15.71■□□□□ 0.1
DNMT1-203ENST00000540357 H3BQV1 296 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 DYNC1I1O14576 645 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 NFE2L2Q16236 605 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 ATP10BO94823 1461 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
DNMT1-203ENST00000540357 VPS37CA5D8V6 355 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-203ENST00000540357 XPCQ01831 940 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-203ENST00000540357 FKBP5Q13451 457 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-203ENST00000540357 ZSCAN23Q3MJ62 389 aa15.69■□□□□ 0.1
DNMT1-203ENST00000540357 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
DNMT1-203ENST00000540357 ZNF592Q92610 1267 aa15.69■□□□□ 0.1
DNMT1-203ENST00000540357 AMPHP49418 695 aa15.68■□□□□ 0.1
DNMT1-203ENST00000540357 RBM25P49756 843 aaKnown RBP15.68■□□□□ 0.1
DNMT1-203ENST00000540357 OFD1O75665 1012 aa15.68■□□□□ 0.1
DNMT1-203ENST00000540357 CCT4P50991 539 aaKnown RBP15.68■□□□□ 0.1
DNMT1-203ENST00000540357 TSPYL4Q9UJ04 414 aa15.68■□□□□ 0.1
DNMT1-203ENST00000540357 DENND4BO75064 1496 aaPredicted RBP15.68■□□□□ 0.1
DNMT1-203ENST00000540357 GNAI2P04899 355 aa15.68■□□□□ 0.1
DNMT1-203ENST00000540357 TRMT2AQ8IZ69 625 aaKnown RBP15.68■□□□□ 0.1
DNMT1-203ENST00000540357 RNF20Q5VTR2 975 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
DNMT1-203ENST00000540357 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 CNTROBQ8N137 903 aa15.67■□□□□ 0.1
DNMT1-203ENST00000540357 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
DNMT1-203ENST00000540357 CCDC192P0DO97 292 aa15.66■□□□□ 0.1
DNMT1-203ENST00000540357 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
DNMT1-203ENST00000540357 LRRCC1Q9C099 1032 aa15.66■□□□□ 0.1
DNMT1-203ENST00000540357 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
DNMT1-203ENST00000540357 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
DNMT1-203ENST00000540357 GNL2Q13823 731 aaKnown RBP15.65■□□□□ 0.1
DNMT1-203ENST00000540357 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
DNMT1-203ENST00000540357 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
DNMT1-203ENST00000540357 SYCP2Q9BX26 1530 aa15.65■□□□□ 0.1
DNMT1-203ENST00000540357 LRSAM1Q6UWE0 723 aa15.65■□□□□ 0.1
DNMT1-203ENST00000540357 BCORL1Q5H9F3 1711 aa15.65■□□□□ 0.1
DNMT1-203ENST00000540357 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms