RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 FOXO3O43524 673 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 PSME1Q06323 249 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 ACEP12821 1306 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
CYB561A3-214ENST00000540139 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
CYB561A3-214ENST00000540139 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
CYB561A3-214ENST00000540139 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
CYB561A3-214ENST00000540139 RGPD8O14715 1765 aaPredicted RBP16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 PAXIP1Q6ZW49 1069 aaPredicted RBP16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
CYB561A3-214ENST00000540139 ZNF316A6NFI3 1004 aaPredicted RBP16.33■□□□□ 0.2
CYB561A3-214ENST00000540139 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
CYB561A3-214ENST00000540139 SBNO1A3KN83 1393 aa16.33■□□□□ 0.2
CYB561A3-214ENST00000540139 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.2
CYB561A3-214ENST00000540139 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
CYB561A3-214ENST00000540139 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
CYB561A3-214ENST00000540139 USP6P35125 1406 aa16.3■□□□□ 0.2
CYB561A3-214ENST00000540139 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
CYB561A3-214ENST00000540139 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
CYB561A3-214ENST00000540139 PXDNQ92626 1479 aa16.29■□□□□ 0.2
CYB561A3-214ENST00000540139 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
CYB561A3-214ENST00000540139 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
CYB561A3-214ENST00000540139 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
CYB561A3-214ENST00000540139 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
CYB561A3-214ENST00000540139 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
CYB561A3-214ENST00000540139 PANK3Q9H999 370 aa16.28■□□□□ 0.2
CYB561A3-214ENST00000540139 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.2
CYB561A3-214ENST00000540139 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
CYB561A3-214ENST00000540139 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
CYB561A3-214ENST00000540139 ARXQ96QS3 562 aa16.27■□□□□ 0.2
CYB561A3-214ENST00000540139 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
CYB561A3-214ENST00000540139 HSPA1LP34931 641 aa16.26■□□□□ 0.19
CYB561A3-214ENST00000540139 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
CYB561A3-214ENST00000540139 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
CYB561A3-214ENST00000540139 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
CYB561A3-214ENST00000540139 AKAP12Q02952 1782 aa16.24■□□□□ 0.19
CYB561A3-214ENST00000540139 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
CYB561A3-214ENST00000540139 XPCQ01831 940 aaPredicted RBP16.24■□□□□ 0.19
CYB561A3-214ENST00000540139 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
CYB561A3-214ENST00000540139 MYOM1P52179 1685 aa16.24■□□□□ 0.19
CYB561A3-214ENST00000540139 JCADQ9P266 1359 aa16.23■□□□□ 0.19
CYB561A3-214ENST00000540139 COL16A1Q07092 1604 aaPredicted RBP16.23■□□□□ 0.19
CYB561A3-214ENST00000540139 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 NLRP13Q86W25 1043 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 ABTB2Q8N961 1025 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 PHLPP1O60346 1717 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
CYB561A3-214ENST00000540139 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.19
CYB561A3-214ENST00000540139 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
CYB561A3-214ENST00000540139 FYB1O15117 783 aa16.2■□□□□ 0.18
CYB561A3-214ENST00000540139 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
CYB561A3-214ENST00000540139 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
CYB561A3-214ENST00000540139 NSD2O96028 1365 aa16.19■□□□□ 0.18
CYB561A3-214ENST00000540139 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
CYB561A3-214ENST00000540139 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
CYB561A3-214ENST00000540139 NLRP6P59044 892 aa16.18■□□□□ 0.18
CYB561A3-214ENST00000540139 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
CYB561A3-214ENST00000540139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.18■□□□□ 0.18
CYB561A3-214ENST00000540139 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
CYB561A3-214ENST00000540139 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
CYB561A3-214ENST00000540139 USP19O94966 1318 aa16.17■□□□□ 0.18
CYB561A3-214ENST00000540139 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-214ENST00000540139 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
CYB561A3-214ENST00000540139 NME9Q86XW9 330 aa16.16■□□□□ 0.18
CYB561A3-214ENST00000540139 COG3Q96JB2 828 aa16.16■□□□□ 0.18
CYB561A3-214ENST00000540139 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
CYB561A3-214ENST00000540139 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
CYB561A3-214ENST00000540139 MED1Q15648 1581 aaPredicted RBP16.14■□□□□ 0.17
CYB561A3-214ENST00000540139 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
CYB561A3-214ENST00000540139 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
CYB561A3-214ENST00000540139 OVOS2A0A0J9YW53 1432 aa16.13■□□□□ 0.17
CYB561A3-214ENST00000540139 OVOS2Q6IE36 1432 aa16.13■□□□□ 0.17
CYB561A3-214ENST00000540139 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
CYB561A3-214ENST00000540139 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
CYB561A3-214ENST00000540139 SHPRHQ149N8 1683 aa16.13■□□□□ 0.17
CYB561A3-214ENST00000540139 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
CYB561A3-214ENST00000540139 GCP02774 474 aa16.12■□□□□ 0.17
CYB561A3-214ENST00000540139 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
CYB561A3-214ENST00000540139 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
CYB561A3-214ENST00000540139 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
CYB561A3-214ENST00000540139 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
CYB561A3-214ENST00000540139 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
CYB561A3-214ENST00000540139 CPDO75976 1380 aa16.1■□□□□ 0.17
CYB561A3-214ENST00000540139 SLIT3O75094 1523 aa16.09■□□□□ 0.17
CYB561A3-214ENST00000540139 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
CYB561A3-214ENST00000540139 MORC1Q86VD1 984 aa16.08■□□□□ 0.16
CYB561A3-214ENST00000540139 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
CYB561A3-214ENST00000540139 ARHGEF25Q86VW2 580 aa16.07■□□□□ 0.16
CYB561A3-214ENST00000540139 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms