RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 COG3Q96JB2 828 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 POLR3AO14802 1390 aaPredicted RBP13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 SOX12O15370 315 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 FOXO3O43524 673 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
PABPC1P4-201ENST00000539977 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
PABPC1P4-201ENST00000539977 FMN2Q9NZ56 1722 aa13.85□□□□□ -0.19
PABPC1P4-201ENST00000539977 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
PABPC1P4-201ENST00000539977 PSME1Q06323 249 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.2
PABPC1P4-201ENST00000539977 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 MSH6P52701 1360 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 NLRP6P59044 892 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 MST1RQ04912 1400 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 NCOA3Q9Y6Q9 1424 aa13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 KIF20BQ96Q89 1820 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.2
PABPC1P4-201ENST00000539977 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 DCCP43146 1447 aa13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 APAF1O14727 1248 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 HMOX1P09601 288 aa13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 IL13P35225 146 aa13.71□□□□□ -0.21
PABPC1P4-201ENST00000539977 AMPHP49418 695 aa13.71□□□□□ -0.21
PABPC1P4-201ENST00000539977 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 INSRP06213 1382 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
PABPC1P4-201ENST00000539977 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
PABPC1P4-201ENST00000539977 GCP02774 474 aa13.68□□□□□ -0.22
PABPC1P4-201ENST00000539977 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
PABPC1P4-201ENST00000539977 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 HOXC9P31274 260 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 FLT4P35916 1363 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 FCHSD2O94868 740 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 PXDNQ92626 1479 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 USP19O94966 1318 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms