RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MON2Q7Z3U7 1717 aa22.61■■□□□ 1.21
PCDHB17P-201ENST00000539533 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
PCDHB17P-201ENST00000539533 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
PCDHB17P-201ENST00000539533 ITSN1Q15811 1721 aa22.61■■□□□ 1.21
PCDHB17P-201ENST00000539533 NKTRP30414 1462 aaKnown RBP22.6■■□□□ 1.21
PCDHB17P-201ENST00000539533 FBLN1P23142 703 aa22.6■■□□□ 1.21
PCDHB17P-201ENST00000539533 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
PCDHB17P-201ENST00000539533 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
PCDHB17P-201ENST00000539533 RGPD8O14715 1765 aaPredicted RBP22.59■■□□□ 1.21
PCDHB17P-201ENST00000539533 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
PCDHB17P-201ENST00000539533 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.2
PCDHB17P-201ENST00000539533 HSPA2P54652 639 aa22.57■■□□□ 1.2
PCDHB17P-201ENST00000539533 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
PCDHB17P-201ENST00000539533 NALCNQ8IZF0 1738 aa22.55■■□□□ 1.2
PCDHB17P-201ENST00000539533 TTC21BQ7Z4L5 1316 aa22.54■■□□□ 1.2
PCDHB17P-201ENST00000539533 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
PCDHB17P-201ENST00000539533 USP6P35125 1406 aa22.53■■□□□ 1.2
PCDHB17P-201ENST00000539533 APAF1O14727 1248 aa22.53■■□□□ 1.2
PCDHB17P-201ENST00000539533 NGDNQ8NEJ9 315 aaKnown RBP22.53■■□□□ 1.2
PCDHB17P-201ENST00000539533 CDCA7LQ96GN5 454 aa22.53■■□□□ 1.2
PCDHB17P-201ENST00000539533 COG3Q96JB2 828 aa22.53■■□□□ 1.2
PCDHB17P-201ENST00000539533 FMN2Q9NZ56 1722 aa22.52■■□□□ 1.2
PCDHB17P-201ENST00000539533 POLKQ9UBT6 870 aa22.52■■□□□ 1.2
PCDHB17P-201ENST00000539533 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
PCDHB17P-201ENST00000539533 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
PCDHB17P-201ENST00000539533 PDE3BQ13370 1112 aa22.5■■□□□ 1.19
PCDHB17P-201ENST00000539533 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
PCDHB17P-201ENST00000539533 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
PCDHB17P-201ENST00000539533 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
PCDHB17P-201ENST00000539533 SSH2Q76I76 1423 aa22.49■■□□□ 1.19
PCDHB17P-201ENST00000539533 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
PCDHB17P-201ENST00000539533 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 NWD1Q149M9 1564 aa22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 MAP2P11137 1827 aaKnown RBP22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 PROSER2Q86WR7 435 aaPredicted RBP22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
PCDHB17P-201ENST00000539533 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
PCDHB17P-201ENST00000539533 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
PCDHB17P-201ENST00000539533 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
PCDHB17P-201ENST00000539533 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
PCDHB17P-201ENST00000539533 ZNF521Q96K83 1311 aa22.45■■□□□ 1.18
PCDHB17P-201ENST00000539533 DIAPH1O60610 1272 aaKnown RBP22.45■■□□□ 1.18
PCDHB17P-201ENST00000539533 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
PCDHB17P-201ENST00000539533 LMTK3Q96Q04 1460 aa22.44■■□□□ 1.18
PCDHB17P-201ENST00000539533 PHF8Q9UPP1 1060 aa22.43■■□□□ 1.18
PCDHB17P-201ENST00000539533 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
PCDHB17P-201ENST00000539533 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
PCDHB17P-201ENST00000539533 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
PCDHB17P-201ENST00000539533 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
PCDHB17P-201ENST00000539533 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
PCDHB17P-201ENST00000539533 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
PCDHB17P-201ENST00000539533 RRP7AQ9Y3A4 280 aaKnown RBP22.4■■□□□ 1.18
PCDHB17P-201ENST00000539533 GOLGA2Q08379 1002 aa22.39■■□□□ 1.18
PCDHB17P-201ENST00000539533 STRCP1A6NGW2 1772 aa22.39■■□□□ 1.17
PCDHB17P-201ENST00000539533 SOX12O15370 315 aa22.38■■□□□ 1.17
PCDHB17P-201ENST00000539533 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
PCDHB17P-201ENST00000539533 IQSEC2Q5JU85 1478 aa22.37■■□□□ 1.17
PCDHB17P-201ENST00000539533 PLEKHF1Q96S99 279 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 ORAI2Q96SN7 254 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 CDK12Q9NYV4 1490 aaPredicted RBP22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 NGEFQ8N5V2 710 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 SPINK5Q9NQ38 1064 aaPredicted RBP22.36■■□□□ 1.17
PCDHB17P-201ENST00000539533 NUTM2GQ5VZR2 741 aa22.35■■□□□ 1.17
PCDHB17P-201ENST00000539533 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
PCDHB17P-201ENST00000539533 PIK3C2AO00443 1686 aa22.35■■□□□ 1.17
PCDHB17P-201ENST00000539533 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
PCDHB17P-201ENST00000539533 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
PCDHB17P-201ENST00000539533 IL13P35225 146 aa22.34■■□□□ 1.17
PCDHB17P-201ENST00000539533 NLRP6P59044 892 aa22.34■■□□□ 1.17
PCDHB17P-201ENST00000539533 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
PCDHB17P-201ENST00000539533 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
PCDHB17P-201ENST00000539533 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
PCDHB17P-201ENST00000539533 DEKP35659 375 aaKnown RBP22.33■■□□□ 1.17
PCDHB17P-201ENST00000539533 ABTB2Q8N961 1025 aa22.33■■□□□ 1.16
PCDHB17P-201ENST00000539533 PSME1Q06323 249 aa22.32■■□□□ 1.16
PCDHB17P-201ENST00000539533 FOXO3O43524 673 aa22.31■■□□□ 1.16
PCDHB17P-201ENST00000539533 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
PCDHB17P-201ENST00000539533 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
PCDHB17P-201ENST00000539533 FCHSD2O94868 740 aa22.3■■□□□ 1.16
PCDHB17P-201ENST00000539533 HMOX1P09601 288 aa22.3■■□□□ 1.16
PCDHB17P-201ENST00000539533 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
PCDHB17P-201ENST00000539533 RSPH6AQ9H0K4 717 aa22.29■■□□□ 1.16
PCDHB17P-201ENST00000539533 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
PCDHB17P-201ENST00000539533 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
PCDHB17P-201ENST00000539533 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
PCDHB17P-201ENST00000539533 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
PCDHB17P-201ENST00000539533 XPCQ01831 940 aaPredicted RBP22.28■■□□□ 1.16
PCDHB17P-201ENST00000539533 CCDC136Q96JN2 1154 aa22.28■■□□□ 1.16
PCDHB17P-201ENST00000539533 E9PSI1 815 aa22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 ATF3P18847 181 aa22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 PRKAR2BP31323 418 aa22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 TMPOP42166 694 aaKnown RBP22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.16
PCDHB17P-201ENST00000539533 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms