RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
GNE-204ENST00000539208 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
GNE-204ENST00000539208 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
GNE-204ENST00000539208 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
GNE-204ENST00000539208 CPS1P31327 1500 aa23.2■■□□□ 1.3
GNE-204ENST00000539208 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
GNE-204ENST00000539208 U2SURPO15042 1029 aaKnown RBP23.19■■□□□ 1.3
GNE-204ENST00000539208 DIAPH1O60610 1272 aaKnown RBP23.19■■□□□ 1.3
GNE-204ENST00000539208 AAMPQ13685 434 aa23.19■■□□□ 1.3
GNE-204ENST00000539208 NOP58Q9Y2X3 529 aaKnown RBP23.19■■□□□ 1.3
GNE-204ENST00000539208 CT47B1P0C2W7 299 aaPredicted RBP23.18■■□□□ 1.3
GNE-204ENST00000539208 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
GNE-204ENST00000539208 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
GNE-204ENST00000539208 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
GNE-204ENST00000539208 IL16Q14005 1332 aa23.16■■□□□ 1.3
GNE-204ENST00000539208 CANXP27824 592 aaKnown RBP23.16■■□□□ 1.3
GNE-204ENST00000539208 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
GNE-204ENST00000539208 TXNDC2Q86VQ3 553 aa23.14■■□□□ 1.3
GNE-204ENST00000539208 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.3
GNE-204ENST00000539208 FCHSD2O94868 740 aa23.13■■□□□ 1.29
GNE-204ENST00000539208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.13■■□□□ 1.29
GNE-204ENST00000539208 POLKQ9UBT6 870 aa23.13■■□□□ 1.29
GNE-204ENST00000539208 CLUAP1Q96AJ1 413 aa23.13■■□□□ 1.29
GNE-204ENST00000539208 NUDT16Q96DE0 195 aaKnown RBP23.12■■□□□ 1.29
GNE-204ENST00000539208 SKAP1Q86WV1 359 aa23.11■■□□□ 1.29
GNE-204ENST00000539208 PANK1Q8TE04 598 aa23.11■■□□□ 1.29
GNE-204ENST00000539208 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
GNE-204ENST00000539208 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
GNE-204ENST00000539208 ADAMTS13Q76LX8 1427 aa23.1■■□□□ 1.29
GNE-204ENST00000539208 FRAT1Q92837 279 aaPredicted RBP23.1■■□□□ 1.29
GNE-204ENST00000539208 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
GNE-204ENST00000539208 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
GNE-204ENST00000539208 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
GNE-204ENST00000539208 ZBTB47Q9UFB7 747 aaPredicted RBP23.08■■□□□ 1.29
GNE-204ENST00000539208 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
GNE-204ENST00000539208 AKAP12Q02952 1782 aa23.08■■□□□ 1.29
GNE-204ENST00000539208 RIPK4P57078 832 aa23.07■■□□□ 1.28
GNE-204ENST00000539208 ZNF692Q9BU19 519 aaPredicted RBP23.07■■□□□ 1.28
GNE-204ENST00000539208 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
GNE-204ENST00000539208 LRRC7Q96NW7 1537 aa23.06■■□□□ 1.28
GNE-204ENST00000539208 IGHDP01880 384 aa23.06■■□□□ 1.28
GNE-204ENST00000539208 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
GNE-204ENST00000539208 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
GNE-204ENST00000539208 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
GNE-204ENST00000539208 C3P01024 1663 aa23.05■■□□□ 1.28
GNE-204ENST00000539208 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
GNE-204ENST00000539208 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
GNE-204ENST00000539208 NME9Q86XW9 330 aa23.04■■□□□ 1.28
GNE-204ENST00000539208 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
GNE-204ENST00000539208 RLBP1P12271 317 aa23.03■■□□□ 1.28
GNE-204ENST00000539208 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
GNE-204ENST00000539208 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
GNE-204ENST00000539208 ZKSCAN2Q63HK3 967 aa23.02■■□□□ 1.28
GNE-204ENST00000539208 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 NEFMP07197 916 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 LTKP29376 864 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
GNE-204ENST00000539208 COG3Q96JB2 828 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 BCL2L13Q9BXK5 485 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 IL13P35225 146 aa23.01■■□□□ 1.27
GNE-204ENST00000539208 SIPA1L2Q9P2F8 1722 aaPredicted RBP23■■□□□ 1.27
GNE-204ENST00000539208 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
GNE-204ENST00000539208 FBLN1P23142 703 aa23■■□□□ 1.27
GNE-204ENST00000539208 PRKAR2BP31323 418 aa23■■□□□ 1.27
GNE-204ENST00000539208 C8orf34Q49A92 452 aa23■■□□□ 1.27
GNE-204ENST00000539208 SLIT1O75093 1534 aa23■■□□□ 1.27
GNE-204ENST00000539208 EMILIN1Q9Y6C2 1016 aa23■■□□□ 1.27
GNE-204ENST00000539208 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
GNE-204ENST00000539208 TOPAZ1Q8N9V7 1692 aa22.99■■□□□ 1.27
GNE-204ENST00000539208 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
GNE-204ENST00000539208 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
GNE-204ENST00000539208 TNNQ9UQP3 1299 aa22.99■■□□□ 1.27
GNE-204ENST00000539208 DZIP1LQ8IYY4 767 aaKnown RBP22.98■■□□□ 1.27
GNE-204ENST00000539208 NFE2L2Q16236 605 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 RGS3P49796 1198 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 ZRANB1Q9UGI0 708 aa22.97■■□□□ 1.27
GNE-204ENST00000539208 SSH1Q8WYL5 1049 aa22.96■■□□□ 1.27
GNE-204ENST00000539208 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
GNE-204ENST00000539208 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
GNE-204ENST00000539208 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
GNE-204ENST00000539208 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
GNE-204ENST00000539208 ZNF428Q96B54 188 aa22.95■■□□□ 1.26
GNE-204ENST00000539208 PTPRUQ92729 1446 aa22.94■■□□□ 1.26
GNE-204ENST00000539208 CEBPAP49715 358 aaPredicted RBP22.94■■□□□ 1.26
GNE-204ENST00000539208 ALDH1L2Q3SY69 923 aa22.94■■□□□ 1.26
GNE-204ENST00000539208 PHACTR3Q96KR7 559 aa22.94■■□□□ 1.26
GNE-204ENST00000539208 FTSJ3Q8IY81 847 aaKnown RBP22.93■■□□□ 1.26
GNE-204ENST00000539208 RWDD1Q9H446 243 aaPredicted RBP22.93■■□□□ 1.26
GNE-204ENST00000539208 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
GNE-204ENST00000539208 ATF7IPQ6VMQ6 1270 aa22.92■■□□□ 1.26
GNE-204ENST00000539208 TTC21BQ7Z4L5 1316 aa22.92■■□□□ 1.26
GNE-204ENST00000539208 HMOX1P09601 288 aa22.91■■□□□ 1.26
GNE-204ENST00000539208 TRIM27P14373 513 aa22.91■■□□□ 1.26
GNE-204ENST00000539208 BRPF1P55201 1214 aaPredicted RBP22.91■■□□□ 1.26
GNE-204ENST00000539208 KIF16BQ96L93 1317 aa22.91■■□□□ 1.26
GNE-204ENST00000539208 FER1L4A9Z1Z3 1794 aa22.9■■□□□ 1.26
GNE-204ENST00000539208 ACEP12821 1306 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms