RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 CPSF1Q10570 1443 aaKnown RBP21.48■■□□□ 1.03
TMEM258-204ENST00000537328 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
TMEM258-204ENST00000537328 MSH6P52701 1360 aa21.48■■□□□ 1.03
TMEM258-204ENST00000537328 SOCS7O14512 581 aa21.47■■□□□ 1.03
TMEM258-204ENST00000537328 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
TMEM258-204ENST00000537328 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
TMEM258-204ENST00000537328 RNF123Q5XPI4 1314 aa21.46■■□□□ 1.03
TMEM258-204ENST00000537328 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
TMEM258-204ENST00000537328 GGNBP2Q9H3C7 697 aa21.45■■□□□ 1.02
TMEM258-204ENST00000537328 ANKRD26Q9UPS8 1709 aa21.45■■□□□ 1.02
TMEM258-204ENST00000537328 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
TMEM258-204ENST00000537328 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
TMEM258-204ENST00000537328 CDC42BPGQ6DT37 1551 aa21.44■■□□□ 1.02
TMEM258-204ENST00000537328 PLEKHG3A1L390 1219 aa21.43■■□□□ 1.02
TMEM258-204ENST00000537328 RUNDC1Q96C34 613 aa21.43■■□□□ 1.02
TMEM258-204ENST00000537328 GOLGA2Q08379 1002 aa21.42■■□□□ 1.02
TMEM258-204ENST00000537328 RBM33Q96EV2 1170 aaKnown RBP21.41■■□□□ 1.02
TMEM258-204ENST00000537328 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
TMEM258-204ENST00000537328 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
TMEM258-204ENST00000537328 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.02
TMEM258-204ENST00000537328 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
TMEM258-204ENST00000537328 PHLPP1O60346 1717 aa21.39■■□□□ 1.01
TMEM258-204ENST00000537328 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
TMEM258-204ENST00000537328 APAF1O14727 1248 aa21.38■■□□□ 1.01
TMEM258-204ENST00000537328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
TMEM258-204ENST00000537328 COG3Q96JB2 828 aa21.38■■□□□ 1.01
TMEM258-204ENST00000537328 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.38■■□□□ 1.01
TMEM258-204ENST00000537328 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
TMEM258-204ENST00000537328 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
TMEM258-204ENST00000537328 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
TMEM258-204ENST00000537328 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
TMEM258-204ENST00000537328 ANKARQ7Z5J8 1434 aa21.36■■□□□ 1.01
TMEM258-204ENST00000537328 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
TMEM258-204ENST00000537328 E9PSI1 815 aa21.35■■□□□ 1.01
TMEM258-204ENST00000537328 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
TMEM258-204ENST00000537328 SHPRHQ149N8 1683 aa21.34■■□□□ 1.01
TMEM258-204ENST00000537328 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
TMEM258-204ENST00000537328 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
TMEM258-204ENST00000537328 U2AF1L5P0DN76 240 aaPredicted RBP21.34■■□□□ 1.01
TMEM258-204ENST00000537328 U2AF1Q01081 240 aaKnown RBP eCLIP21.34■■□□□ 1.01
TMEM258-204ENST00000537328 MON2Q7Z3U7 1717 aa21.33■■□□□ 1.01
TMEM258-204ENST00000537328 SLFN5Q08AF3 891 aa21.33■■□□□ 1.01
TMEM258-204ENST00000537328 CCDC27Q2M243 656 aa21.33■■□□□ 1.01
TMEM258-204ENST00000537328 CDCA7LQ96GN5 454 aa21.33■■□□□ 1.01
TMEM258-204ENST00000537328 ITSN1Q15811 1721 aa21.32■■□□□ 1
TMEM258-204ENST00000537328 ACEP12821 1306 aa21.32■■□□□ 1
TMEM258-204ENST00000537328 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
TMEM258-204ENST00000537328 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
TMEM258-204ENST00000537328 AKAP12Q02952 1782 aa21.31■■□□□ 1
TMEM258-204ENST00000537328 RRP1P56182 461 aaKnown RBP21.31■■□□□ 1
TMEM258-204ENST00000537328 TTC21BQ7Z4L5 1316 aa21.3■■□□□ 1
TMEM258-204ENST00000537328 IRX6P78412 446 aaPredicted RBP21.3■■□□□ 1
TMEM258-204ENST00000537328 WDR63Q8IWG1 891 aa21.3■■□□□ 1
TMEM258-204ENST00000537328 TRMT2AQ8IZ69 625 aaKnown RBP21.3■■□□□ 1
TMEM258-204ENST00000537328 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
TMEM258-204ENST00000537328 NEFMP07197 916 aa21.29■■□□□ 1
TMEM258-204ENST00000537328 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
TMEM258-204ENST00000537328 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
TMEM258-204ENST00000537328 NME9Q86XW9 330 aa21.28■■□□□ 1
TMEM258-204ENST00000537328 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.28■■□□□ 1
TMEM258-204ENST00000537328 SLAIN2Q9P270 581 aa21.28■■□□□ 1
TMEM258-204ENST00000537328 POLKQ9UBT6 870 aa21.28■■□□□ 1
TMEM258-204ENST00000537328 USP6P35125 1406 aa21.28■■□□□ 1
TMEM258-204ENST00000537328 MAPK8IP3Q9UPT6 1336 aa21.28■■□□□ 1
TMEM258-204ENST00000537328 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
TMEM258-204ENST00000537328 ATF3P18847 181 aa21.27■■□□□ 1
TMEM258-204ENST00000537328 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
TMEM258-204ENST00000537328 FCHSD2O94868 740 aa21.26■□□□□ 0.99
TMEM258-204ENST00000537328 CADPS2Q86UW7 1296 aa21.26■□□□□ 0.99
TMEM258-204ENST00000537328 WWC1Q8IX03 1113 aa21.26■□□□□ 0.99
TMEM258-204ENST00000537328 NGDNQ8NEJ9 315 aaKnown RBP21.26■□□□□ 0.99
TMEM258-204ENST00000537328 DCCP43146 1447 aa21.25■□□□□ 0.99
TMEM258-204ENST00000537328 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
TMEM258-204ENST00000537328 AHDC1Q5TGY3 1603 aaPredicted RBP21.23■□□□□ 0.99
TMEM258-204ENST00000537328 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
TMEM258-204ENST00000537328 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
TMEM258-204ENST00000537328 JCADQ9P266 1359 aa21.22■□□□□ 0.99
TMEM258-204ENST00000537328 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
TMEM258-204ENST00000537328 MYH16Q9H6N6 1097 aa21.21■□□□□ 0.99
TMEM258-204ENST00000537328 NRKQ7Z2Y5 1582 aa21.2■□□□□ 0.98
TMEM258-204ENST00000537328 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
TMEM258-204ENST00000537328 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
TMEM258-204ENST00000537328 PLEKHF1Q96S99 279 aa21.2■□□□□ 0.98
TMEM258-204ENST00000537328 USP31Q70CQ4 1352 aa21.2■□□□□ 0.98
TMEM258-204ENST00000537328 OVOS2A0A0J9YW53 1432 aa21.19■□□□□ 0.98
TMEM258-204ENST00000537328 OVOS2Q6IE36 1432 aa21.19■□□□□ 0.98
TMEM258-204ENST00000537328 ADGRL3Q9HAR2 1447 aa21.19■□□□□ 0.98
TMEM258-204ENST00000537328 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
TMEM258-204ENST00000537328 TMPOP42166 694 aaKnown RBP21.17■□□□□ 0.98
TMEM258-204ENST00000537328 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
TMEM258-204ENST00000537328 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
TMEM258-204ENST00000537328 IL16Q14005 1332 aa21.17■□□□□ 0.98
TMEM258-204ENST00000537328 IL13P35225 146 aa21.16■□□□□ 0.98
TMEM258-204ENST00000537328 ZRANB1Q9UGI0 708 aa21.16■□□□□ 0.98
TMEM258-204ENST00000537328 EMILIN1Q9Y6C2 1016 aa21.16■□□□□ 0.98
TMEM258-204ENST00000537328 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
TMEM258-204ENST00000537328 CT47B1P0C2W7 299 aaPredicted RBP21.15■□□□□ 0.98
TMEM258-204ENST00000537328 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
TMEM258-204ENST00000537328 CALD1Q05682 793 aaKnown RBP21.14■□□□□ 0.97
TMEM258-204ENST00000537328 CCDC136Q96JN2 1154 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms