RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 C1orf167Q5SNV9 1468 aa17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 PLEKHG3A1L390 1219 aa17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 MARF1Q9Y4F3 1742 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-202ENST00000536708 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
CDK5RAP3-202ENST00000536708 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-202ENST00000536708 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
CDK5RAP3-202ENST00000536708 NCOA3Q9Y6Q9 1424 aa17.35■□□□□ 0.37
CDK5RAP3-202ENST00000536708 MSH6P52701 1360 aa17.35■□□□□ 0.37
CDK5RAP3-202ENST00000536708 NME9Q86XW9 330 aa17.35■□□□□ 0.37
CDK5RAP3-202ENST00000536708 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
CDK5RAP3-202ENST00000536708 FYB1O15117 783 aa17.34■□□□□ 0.37
CDK5RAP3-202ENST00000536708 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
CDK5RAP3-202ENST00000536708 NSD2O96028 1365 aa17.34■□□□□ 0.37
CDK5RAP3-202ENST00000536708 SSH2Q76I76 1423 aa17.33■□□□□ 0.37
CDK5RAP3-202ENST00000536708 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.37
CDK5RAP3-202ENST00000536708 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.37
CDK5RAP3-202ENST00000536708 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
CDK5RAP3-202ENST00000536708 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
CDK5RAP3-202ENST00000536708 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-202ENST00000536708 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP3-202ENST00000536708 ATF3P18847 181 aa17.31■□□□□ 0.36
CDK5RAP3-202ENST00000536708 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-202ENST00000536708 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
CDK5RAP3-202ENST00000536708 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
CDK5RAP3-202ENST00000536708 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-202ENST00000536708 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
CDK5RAP3-202ENST00000536708 SHPRHQ149N8 1683 aa17.3■□□□□ 0.36
CDK5RAP3-202ENST00000536708 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-202ENST00000536708 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-202ENST00000536708 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-202ENST00000536708 USP54Q70EL1 1684 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 PNISRQ8TF01 805 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 FBLN1P23142 703 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-202ENST00000536708 DDX17Q92841 729 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-202ENST00000536708 FOXO3O43524 673 aa17.26■□□□□ 0.35
CDK5RAP3-202ENST00000536708 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
CDK5RAP3-202ENST00000536708 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
CDK5RAP3-202ENST00000536708 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-202ENST00000536708 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
CDK5RAP3-202ENST00000536708 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
CDK5RAP3-202ENST00000536708 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 LTN1O94822 1766 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 COG3Q96JB2 828 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 PXDNQ92626 1479 aa17.22■□□□□ 0.35
CDK5RAP3-202ENST00000536708 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
CDK5RAP3-202ENST00000536708 SOX12O15370 315 aa17.21■□□□□ 0.35
CDK5RAP3-202ENST00000536708 PSME1Q06323 249 aa17.21■□□□□ 0.35
CDK5RAP3-202ENST00000536708 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
CDK5RAP3-202ENST00000536708 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-202ENST00000536708 MTHFSP49914 203 aa17.2■□□□□ 0.34
CDK5RAP3-202ENST00000536708 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-202ENST00000536708 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
CDK5RAP3-202ENST00000536708 RRS1Q15050 365 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-202ENST00000536708 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
CDK5RAP3-202ENST00000536708 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
CDK5RAP3-202ENST00000536708 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
CDK5RAP3-202ENST00000536708 PLEKHG5O94827 1062 aa17.18■□□□□ 0.34
CDK5RAP3-202ENST00000536708 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
CDK5RAP3-202ENST00000536708 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
CDK5RAP3-202ENST00000536708 NLRP6P59044 892 aa17.17■□□□□ 0.34
CDK5RAP3-202ENST00000536708 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-202ENST00000536708 INSRP06213 1382 aa17.17■□□□□ 0.34
CDK5RAP3-202ENST00000536708 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
CDK5RAP3-202ENST00000536708 NFAT5O94916 1531 aa17.16■□□□□ 0.34
CDK5RAP3-202ENST00000536708 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-202ENST00000536708 POLKQ9UBT6 870 aa17.16■□□□□ 0.34
CDK5RAP3-202ENST00000536708 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-202ENST00000536708 CDK12Q9NYV4 1490 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-202ENST00000536708 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
CDK5RAP3-202ENST00000536708 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
CDK5RAP3-202ENST00000536708 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
CDK5RAP3-202ENST00000536708 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
CDK5RAP3-202ENST00000536708 TNS3Q68CZ2 1445 aa17.14■□□□□ 0.33
CDK5RAP3-202ENST00000536708 SLIT3O75094 1523 aa17.14■□□□□ 0.33
CDK5RAP3-202ENST00000536708 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-202ENST00000536708 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
CDK5RAP3-202ENST00000536708 PNPLA6Q8IY17 1366 aa17.11■□□□□ 0.33
CDK5RAP3-202ENST00000536708 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK5RAP3-202ENST00000536708 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
CDK5RAP3-202ENST00000536708 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
CDK5RAP3-202ENST00000536708 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
CDK5RAP3-202ENST00000536708 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
CDK5RAP3-202ENST00000536708 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
CDK5RAP3-202ENST00000536708 MSH5O43196 834 aa17.09■□□□□ 0.33
CDK5RAP3-202ENST00000536708 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-202ENST00000536708 USP19O94966 1318 aa17.08■□□□□ 0.33
CDK5RAP3-202ENST00000536708 PHLPP1O60346 1717 aa17.08■□□□□ 0.33
CDK5RAP3-202ENST00000536708 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
CDK5RAP3-202ENST00000536708 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
CDK5RAP3-202ENST00000536708 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms