RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
KPNB1-202ENST00000535458 MVPQ14764 893 aaKnown RBP11.27□□□□□ -0.6
KPNB1-202ENST00000535458 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.6
KPNB1-202ENST00000535458 ABCC11Q96J66 1382 aa11.27□□□□□ -0.61
KPNB1-202ENST00000535458 ADGRB2O60241 1585 aa11.27□□□□□ -0.61
KPNB1-202ENST00000535458 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
KPNB1-202ENST00000535458 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
KPNB1-202ENST00000535458 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
KPNB1-202ENST00000535458 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
KPNB1-202ENST00000535458 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
KPNB1-202ENST00000535458 BECN1Q14457 450 aa11.26□□□□□ -0.61
KPNB1-202ENST00000535458 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
KPNB1-202ENST00000535458 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
KPNB1-202ENST00000535458 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
KPNB1-202ENST00000535458 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 DIP2CQ9Y2E4 1556 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
KPNB1-202ENST00000535458 FYB1O15117 783 aa11.24□□□□□ -0.61
KPNB1-202ENST00000535458 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
KPNB1-202ENST00000535458 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
KPNB1-202ENST00000535458 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
KPNB1-202ENST00000535458 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
KPNB1-202ENST00000535458 UBE2Q2Q8WVN8 375 aa11.24□□□□□ -0.61
KPNB1-202ENST00000535458 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
KPNB1-202ENST00000535458 TRIM27P14373 513 aa11.23□□□□□ -0.61
KPNB1-202ENST00000535458 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
KPNB1-202ENST00000535458 TBC1D32Q96NH3 1257 aa11.23□□□□□ -0.61
KPNB1-202ENST00000535458 ATAD2Q6PL18 1390 aa11.23□□□□□ -0.61
KPNB1-202ENST00000535458 PTPRMP28827 1452 aa11.22□□□□□ -0.61
KPNB1-202ENST00000535458 MYO5BQ9ULV0 1848 aa11.22□□□□□ -0.61
KPNB1-202ENST00000535458 RIPK4P57078 832 aa11.22□□□□□ -0.61
KPNB1-202ENST00000535458 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.61
KPNB1-202ENST00000535458 ARHGEF40Q8TER5 1519 aa11.21□□□□□ -0.61
KPNB1-202ENST00000535458 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.61
KPNB1-202ENST00000535458 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.62
KPNB1-202ENST00000535458 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.62
KPNB1-202ENST00000535458 ATF7IPQ6VMQ6 1270 aa11.21□□□□□ -0.62
KPNB1-202ENST00000535458 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.62
KPNB1-202ENST00000535458 YTHDC2Q9H6S0 1430 aaKnown RBP11.21□□□□□ -0.62
KPNB1-202ENST00000535458 IL16Q14005 1332 aa11.21□□□□□ -0.62
KPNB1-202ENST00000535458 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
KPNB1-202ENST00000535458 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
KPNB1-202ENST00000535458 CDK19Q9BWU1 502 aa11.2□□□□□ -0.62
KPNB1-202ENST00000535458 TMEM131LA2VDJ0 1609 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 MED14O60244 1454 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
KPNB1-202ENST00000535458 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
KPNB1-202ENST00000535458 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 TBC1D2Q9BYX2 928 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 ANKRD26Q9UPS8 1709 aa11.19□□□□□ -0.62
KPNB1-202ENST00000535458 TMEM57Q8N5G2 664 aa11.18□□□□□ -0.62
KPNB1-202ENST00000535458 PNNQ9H307 717 aaKnown RBP11.18□□□□□ -0.62
KPNB1-202ENST00000535458 PREX1Q8TCU6 1659 aa11.18□□□□□ -0.62
KPNB1-202ENST00000535458 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
KPNB1-202ENST00000535458 PNPLA6Q8IY17 1366 aa11.18□□□□□ -0.62
KPNB1-202ENST00000535458 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
KPNB1-202ENST00000535458 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
KPNB1-202ENST00000535458 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
KPNB1-202ENST00000535458 IPO8O15397 1037 aaKnown RBP11.16□□□□□ -0.62
KPNB1-202ENST00000535458 FCHSD2O94868 740 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 FBLN1P23142 703 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 MFAP1P55081 439 aaKnown RBP11.16□□□□□ -0.62
KPNB1-202ENST00000535458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
KPNB1-202ENST00000535458 ZBTB40Q9NUA8 1239 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 PANK2Q9BZ23 570 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
KPNB1-202ENST00000535458 PRKAR2BP31323 418 aa11.15□□□□□ -0.62
KPNB1-202ENST00000535458 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.62
KPNB1-202ENST00000535458 REREQ9P2R6 1566 aa11.14□□□□□ -0.63
KPNB1-202ENST00000535458 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
KPNB1-202ENST00000535458 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
KPNB1-202ENST00000535458 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
KPNB1-202ENST00000535458 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
KPNB1-202ENST00000535458 HMOX1P09601 288 aa11.13□□□□□ -0.63
KPNB1-202ENST00000535458 FAM135BQ49AJ0 1406 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 PHACTR3Q96KR7 559 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 NUCB1Q02818 461 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
KPNB1-202ENST00000535458 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
KPNB1-202ENST00000535458 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
KPNB1-202ENST00000535458 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
KPNB1-202ENST00000535458 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
KPNB1-202ENST00000535458 VAMP4O75379 141 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
KPNB1-202ENST00000535458 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 EMILIN1Q9Y6C2 1016 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 CHD1LQ86WJ1 897 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 ATP7BP35670 1465 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms