RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
MCF2L-232ENST00000535094 CABP1Q9NZU7 370 aa19.64■□□□□ 0.73
MCF2L-232ENST00000535094 CDC45O75419 566 aa19.64■□□□□ 0.73
MCF2L-232ENST00000535094 NUCB1Q02818 461 aa19.64■□□□□ 0.73
MCF2L-232ENST00000535094 SMC5Q8IY18 1101 aa19.64■□□□□ 0.73
MCF2L-232ENST00000535094 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
MCF2L-232ENST00000535094 SMARCA5O60264 1052 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-232ENST00000535094 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
MCF2L-232ENST00000535094 TRIM35Q9UPQ4 493 aa19.62■□□□□ 0.73
MCF2L-232ENST00000535094 ABCA8O94911 1581 aa19.62■□□□□ 0.73
MCF2L-232ENST00000535094 CFAP65Q6ZU64 1925 aaKnown RBP19.62■□□□□ 0.73
MCF2L-232ENST00000535094 ZMYND15Q9H091 742 aa19.62■□□□□ 0.73
MCF2L-232ENST00000535094 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
MCF2L-232ENST00000535094 ARHGEF5Q12774 1597 aa19.61■□□□□ 0.73
MCF2L-232ENST00000535094 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
MCF2L-232ENST00000535094 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
MCF2L-232ENST00000535094 UGGT1Q9NYU2 1555 aa19.6■□□□□ 0.73
MCF2L-232ENST00000535094 ST18O60284 1047 aa19.6■□□□□ 0.73
MCF2L-232ENST00000535094 RBM27Q9P2N5 1060 aaKnown RBP19.6■□□□□ 0.73
MCF2L-232ENST00000535094 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
MCF2L-232ENST00000535094 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
MCF2L-232ENST00000535094 TRIM6-TRIM34B2RNG4 842 aa19.59■□□□□ 0.73
MCF2L-232ENST00000535094 PTMSP20962 102 aa19.59■□□□□ 0.73
MCF2L-232ENST00000535094 CHAMP1Q96JM3 812 aa19.59■□□□□ 0.73
MCF2L-232ENST00000535094 CT47B1P0C2W7 299 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-232ENST00000535094 C14orf93Q9H972 538 aaKnown RBP19.59■□□□□ 0.73
MCF2L-232ENST00000535094 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
MCF2L-232ENST00000535094 BAG4O95429 457 aaKnown RBP19.59■□□□□ 0.73
MCF2L-232ENST00000535094 NECTIN2Q92692 538 aa19.59■□□□□ 0.73
MCF2L-232ENST00000535094 ABCC2Q92887 1545 aa19.58■□□□□ 0.73
MCF2L-232ENST00000535094 GCC1Q96CN9 775 aa19.58■□□□□ 0.73
MCF2L-232ENST00000535094 CIZ1Q9ULV3 898 aaPredicted RBP19.58■□□□□ 0.73
MCF2L-232ENST00000535094 FAM83GA6ND36 823 aa19.58■□□□□ 0.72
MCF2L-232ENST00000535094 BMP2KLQ5H9B9 411 aa19.58■□□□□ 0.72
MCF2L-232ENST00000535094 PLCH2O75038 1416 aa19.58■□□□□ 0.72
MCF2L-232ENST00000535094 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-232ENST00000535094 RILPL2Q969X0 211 aa19.58■□□□□ 0.72
MCF2L-232ENST00000535094 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 RRP9O43818 475 aaKnown RBP19.57■□□□□ 0.72
MCF2L-232ENST00000535094 ATP10AO60312 1499 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 PTPRTO14522 1441 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 CCDC173Q0VFZ6 552 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 FYB1O15117 783 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 RAB3GAP1Q15042 981 aa19.57■□□□□ 0.72
MCF2L-232ENST00000535094 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.72
MCF2L-232ENST00000535094 RRS1Q15050 365 aaKnown RBP19.55■□□□□ 0.72
MCF2L-232ENST00000535094 NEK4P51957 841 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 GNAI1P63096 354 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 NUCB2P80303 420 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
MCF2L-232ENST00000535094 TSHZ3Q63HK5 1081 aa19.54■□□□□ 0.72
MCF2L-232ENST00000535094 ZSCAN30Q86W11 494 aa19.54■□□□□ 0.72
MCF2L-232ENST00000535094 SYNMO15061 1565 aa19.54■□□□□ 0.72
MCF2L-232ENST00000535094 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
MCF2L-232ENST00000535094 SYCE3A1L190 88 aa19.53■□□□□ 0.72
MCF2L-232ENST00000535094 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
MCF2L-232ENST00000535094 INTS3Q68E01 1043 aaKnown RBP19.53■□□□□ 0.72
MCF2L-232ENST00000535094 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
MCF2L-232ENST00000535094 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-232ENST00000535094 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
MCF2L-232ENST00000535094 PKP1Q13835 747 aa19.53■□□□□ 0.72
MCF2L-232ENST00000535094 SNX21Q969T3 373 aa19.53■□□□□ 0.72
MCF2L-232ENST00000535094 ZGPATQ8N5A5 531 aaKnown RBP19.52■□□□□ 0.72
MCF2L-232ENST00000535094 RABEP1Q15276 862 aa19.52■□□□□ 0.72
MCF2L-232ENST00000535094 KRT24Q2M2I5 525 aa19.52■□□□□ 0.72
MCF2L-232ENST00000535094 ANO2Q9NQ90 1003 aa19.52■□□□□ 0.71
MCF2L-232ENST00000535094 ISY1Q9ULR0 285 aaKnown RBP19.52■□□□□ 0.71
MCF2L-232ENST00000535094 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
MCF2L-232ENST00000535094 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
MCF2L-232ENST00000535094 WAPLQ7Z5K2 1190 aa19.51■□□□□ 0.71
MCF2L-232ENST00000535094 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-232ENST00000535094 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-232ENST00000535094 C8orf58Q8NAV2 365 aa19.49■□□□□ 0.71
MCF2L-232ENST00000535094 MBIPQ9NS73 344 aa19.49■□□□□ 0.71
MCF2L-232ENST00000535094 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
MCF2L-232ENST00000535094 FCHSD2O94868 740 aa19.49■□□□□ 0.71
MCF2L-232ENST00000535094 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
MCF2L-232ENST00000535094 KDM5AP29375 1690 aaKnown RBP19.48■□□□□ 0.71
MCF2L-232ENST00000535094 IDI1Q13907 227 aa19.48■□□□□ 0.71
MCF2L-232ENST00000535094 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
MCF2L-232ENST00000535094 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
MCF2L-232ENST00000535094 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
MCF2L-232ENST00000535094 ALDH1L2Q3SY69 923 aa19.48■□□□□ 0.71
MCF2L-232ENST00000535094 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.48■□□□□ 0.71
MCF2L-232ENST00000535094 VAMP4O75379 141 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 REC8O95072 547 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 TPM2P07951 284 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 ZSCAN23Q3MJ62 389 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 KLHL40Q2TBA0 621 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 MYO5CQ9NQX4 1742 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-232ENST00000535094 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
MCF2L-232ENST00000535094 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
MCF2L-232ENST00000535094 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
MCF2L-232ENST00000535094 ZNF692Q9BU19 519 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-232ENST00000535094 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
MCF2L-232ENST00000535094 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
MCF2L-232ENST00000535094 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms