RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 MAPK8IP3Q9UPT6 1336 aa24.18■■□□□ 1.46
COPS7A-204ENST00000534947 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
COPS7A-204ENST00000534947 PANK1Q8TE04 598 aa24.17■■□□□ 1.46
COPS7A-204ENST00000534947 COG6Q9Y2V7 657 aa24.16■■□□□ 1.46
COPS7A-204ENST00000534947 IGHDP01880 384 aa24.15■■□□□ 1.46
COPS7A-204ENST00000534947 TMPOP42166 694 aaKnown RBP24.15■■□□□ 1.46
COPS7A-204ENST00000534947 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
COPS7A-204ENST00000534947 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.13■■□□□ 1.45
COPS7A-204ENST00000534947 FRAT1Q92837 279 aaPredicted RBP24.13■■□□□ 1.45
COPS7A-204ENST00000534947 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
COPS7A-204ENST00000534947 DIAPH1O60610 1272 aaKnown RBP24.12■■□□□ 1.45
COPS7A-204ENST00000534947 RTL5Q5HYW3 569 aaPredicted RBP24.12■■□□□ 1.45
COPS7A-204ENST00000534947 NBR1Q14596 966 aa24.11■■□□□ 1.45
COPS7A-204ENST00000534947 USP35Q9P2H5 1018 aa24.11■■□□□ 1.45
COPS7A-204ENST00000534947 U2SURPO15042 1029 aaKnown RBP24.11■■□□□ 1.45
COPS7A-204ENST00000534947 PPM1GO15355 546 aaPredicted RBP24.11■■□□□ 1.45
COPS7A-204ENST00000534947 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
COPS7A-204ENST00000534947 RGS3P49796 1198 aa24.1■■□□□ 1.45
COPS7A-204ENST00000534947 TRIM35Q9UPQ4 493 aa24.1■■□□□ 1.45
COPS7A-204ENST00000534947 SIRT1Q96EB6 747 aa24.09■■□□□ 1.45
COPS7A-204ENST00000534947 TECPR2O15040 1411 aa24.08■■□□□ 1.45
COPS7A-204ENST00000534947 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.45
COPS7A-204ENST00000534947 ZKSCAN2Q63HK3 967 aa24.08■■□□□ 1.45
COPS7A-204ENST00000534947 CPSF1Q10570 1443 aaKnown RBP24.08■■□□□ 1.44
COPS7A-204ENST00000534947 FCHSD2O94868 740 aa24.08■■□□□ 1.44
COPS7A-204ENST00000534947 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
COPS7A-204ENST00000534947 RLBP1P12271 317 aa24.06■■□□□ 1.44
COPS7A-204ENST00000534947 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
COPS7A-204ENST00000534947 MVPQ14764 893 aaKnown RBP24.05■■□□□ 1.44
COPS7A-204ENST00000534947 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
COPS7A-204ENST00000534947 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
COPS7A-204ENST00000534947 CPS1P31327 1500 aa24.04■■□□□ 1.44
COPS7A-204ENST00000534947 DEKP35659 375 aaKnown RBP24.04■■□□□ 1.44
COPS7A-204ENST00000534947 RWDD1Q9H446 243 aaPredicted RBP24.04■■□□□ 1.44
COPS7A-204ENST00000534947 MAP2P11137 1827 aaKnown RBP24.03■■□□□ 1.44
COPS7A-204ENST00000534947 MON2Q7Z3U7 1717 aa24.03■■□□□ 1.44
COPS7A-204ENST00000534947 DZIP1LQ8IYY4 767 aaKnown RBP24.03■■□□□ 1.44
COPS7A-204ENST00000534947 PCDHB15Q9Y5E8 787 aa24.02■■□□□ 1.44
COPS7A-204ENST00000534947 AATKQ6ZMQ8 1374 aa24.02■■□□□ 1.44
COPS7A-204ENST00000534947 PPIP5K1Q6PFW1 1433 aa24.02■■□□□ 1.44
COPS7A-204ENST00000534947 WASLO00401 505 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-204ENST00000534947 RIPK4P57078 832 aa24.01■■□□□ 1.43
COPS7A-204ENST00000534947 WAPLQ7Z5K2 1190 aa24.01■■□□□ 1.43
COPS7A-204ENST00000534947 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-204ENST00000534947 CDK12Q9NYV4 1490 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-204ENST00000534947 EXOSC9Q06265 439 aaKnown RBP24.01■■□□□ 1.43
COPS7A-204ENST00000534947 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
COPS7A-204ENST00000534947 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
COPS7A-204ENST00000534947 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
COPS7A-204ENST00000534947 TSR2Q969E8 191 aaKnown RBP24■■□□□ 1.43
COPS7A-204ENST00000534947 SMC4Q9NTJ3 1288 aa24■■□□□ 1.43
COPS7A-204ENST00000534947 POLKQ9UBT6 870 aa24■■□□□ 1.43
COPS7A-204ENST00000534947 DAXXQ9UER7 740 aaPredicted RBP24■■□□□ 1.43
COPS7A-204ENST00000534947 AKAP12Q02952 1782 aa23.99■■□□□ 1.43
COPS7A-204ENST00000534947 NEFMP07197 916 aa23.99■■□□□ 1.43
COPS7A-204ENST00000534947 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
COPS7A-204ENST00000534947 ESF1Q9H501 851 aaKnown RBP23.98■■□□□ 1.43
COPS7A-204ENST00000534947 KIF16BQ96L93 1317 aa23.98■■□□□ 1.43
COPS7A-204ENST00000534947 METP08581 1390 aa23.98■■□□□ 1.43
COPS7A-204ENST00000534947 ALDH1L2Q3SY69 923 aa23.98■■□□□ 1.43
COPS7A-204ENST00000534947 DDX19BQ9UMR2 479 aa23.97■■□□□ 1.43
COPS7A-204ENST00000534947 TNNQ9UQP3 1299 aa23.97■■□□□ 1.43
COPS7A-204ENST00000534947 ITSN1Q15811 1721 aa23.97■■□□□ 1.43
COPS7A-204ENST00000534947 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
COPS7A-204ENST00000534947 BRPF1P55201 1214 aaPredicted RBP23.96■■□□□ 1.43
COPS7A-204ENST00000534947 CALD1Q05682 793 aaKnown RBP23.96■■□□□ 1.43
COPS7A-204ENST00000534947 ATF7IPQ6VMQ6 1270 aa23.96■■□□□ 1.43
COPS7A-204ENST00000534947 SSH1Q8WYL5 1049 aa23.96■■□□□ 1.43
COPS7A-204ENST00000534947 C3P01024 1663 aa23.95■■□□□ 1.42
COPS7A-204ENST00000534947 TNRQ92752 1358 aa23.95■■□□□ 1.42
COPS7A-204ENST00000534947 IPO8O15397 1037 aaKnown RBP23.94■■□□□ 1.42
COPS7A-204ENST00000534947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
COPS7A-204ENST00000534947 TRIM27P14373 513 aa23.94■■□□□ 1.42
COPS7A-204ENST00000534947 HDAC1Q13547 482 aaPredicted RBP23.93■■□□□ 1.42
COPS7A-204ENST00000534947 MLECQ14165 292 aa23.93■■□□□ 1.42
COPS7A-204ENST00000534947 LAS1LQ9Y4W2 734 aaKnown RBP23.93■■□□□ 1.42
COPS7A-204ENST00000534947 CCDC61Q9Y6R9 512 aa23.93■■□□□ 1.42
COPS7A-204ENST00000534947 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
COPS7A-204ENST00000534947 PDZRN3Q9UPQ7 1066 aa23.92■■□□□ 1.42
COPS7A-204ENST00000534947 PRKAR2BP31323 418 aa23.91■■□□□ 1.42
COPS7A-204ENST00000534947 ZNF692Q9BU19 519 aaPredicted RBP23.91■■□□□ 1.42
COPS7A-204ENST00000534947 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
COPS7A-204ENST00000534947 USP19O94966 1318 aa23.91■■□□□ 1.42
COPS7A-204ENST00000534947 NUDT16Q96DE0 195 aaKnown RBP23.91■■□□□ 1.42
COPS7A-204ENST00000534947 IL13P35225 146 aa23.89■■□□□ 1.41
COPS7A-204ENST00000534947 NOB1Q9ULX3 412 aaKnown RBP23.88■■□□□ 1.41
COPS7A-204ENST00000534947 NRKQ7Z2Y5 1582 aa23.87■■□□□ 1.41
COPS7A-204ENST00000534947 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
COPS7A-204ENST00000534947 COG3Q96JB2 828 aa23.87■■□□□ 1.41
COPS7A-204ENST00000534947 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
COPS7A-204ENST00000534947 TOPAZ1Q8N9V7 1692 aa23.86■■□□□ 1.41
COPS7A-204ENST00000534947 GNAI1P63096 354 aa23.85■■□□□ 1.41
COPS7A-204ENST00000534947 NME9Q86XW9 330 aa23.85■■□□□ 1.41
COPS7A-204ENST00000534947 ITPRIPQ8IWB1 547 aa23.85■■□□□ 1.41
COPS7A-204ENST00000534947 CHMP4BQ9H444 224 aaKnown RBP23.85■■□□□ 1.41
COPS7A-204ENST00000534947 IFT57Q9NWB7 429 aa23.85■■□□□ 1.41
COPS7A-204ENST00000534947 BCL11AQ9H165 835 aa23.84■■□□□ 1.41
COPS7A-204ENST00000534947 UPF2Q9HAU5 1272 aaKnown RBP23.84■■□□□ 1.41
COPS7A-204ENST00000534947 ADAMTS13Q76LX8 1427 aa23.84■■□□□ 1.41
COPS7A-204ENST00000534947 PLEKHG1Q9ULL1 1385 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms