RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 DIAPH3Q9NSV4 1193 aa13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 RIMS2Q9UQ26 1411 aa13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 GBP4Q96PP9 640 aa13.82□□□□□ -0.2
AMBRA1-211ENST00000533727 ERC2O15083 957 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 FCHSD2O94868 740 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 UBTFL1P0CB47 393 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 ARID3AQ99856 593 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 GZF1Q9H116 711 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 CENPQQ7L2Z9 268 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 NSD2O96028 1365 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 FOXO3O43524 673 aa13.81□□□□□ -0.2
AMBRA1-211ENST00000533727 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 BCL2L13Q9BXK5 485 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 STARD3NLO95772 234 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 CFAP74Q9C0B2 1584 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
AMBRA1-211ENST00000533727 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
AMBRA1-211ENST00000533727 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 ST18O60284 1047 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 CLSTN1O94985 981 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-211ENST00000533727 TTC21BQ7Z4L5 1316 aa13.77□□□□□ -0.2
AMBRA1-211ENST00000533727 EXOC5O00471 708 aa13.77□□□□□ -0.21
AMBRA1-211ENST00000533727 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-211ENST00000533727 TMOD3Q9NYL9 352 aa13.77□□□□□ -0.21
AMBRA1-211ENST00000533727 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
AMBRA1-211ENST00000533727 MARCH6O60337 910 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 TRDNQ13061 729 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 ERC1Q8IUD2 1116 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 WDR63Q8IWG1 891 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 TBX22Q9Y458 520 aa13.76□□□□□ -0.21
AMBRA1-211ENST00000533727 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 REC8O95072 547 aa13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
AMBRA1-211ENST00000533727 COG6Q9Y2V7 657 aa13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-211ENST00000533727 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-211ENST00000533727 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
AMBRA1-211ENST00000533727 APPP05067 770 aa13.73□□□□□ -0.21
AMBRA1-211ENST00000533727 GSE1Q14687 1217 aa13.73□□□□□ -0.21
AMBRA1-211ENST00000533727 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
AMBRA1-211ENST00000533727 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 ERICH2A1L162 156 aa13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 ZFYVE16Q7Z3T8 1539 aa13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
AMBRA1-211ENST00000533727 ATP7AQ04656 1500 aa13.71□□□□□ -0.21
AMBRA1-211ENST00000533727 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
AMBRA1-211ENST00000533727 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
AMBRA1-211ENST00000533727 ZPR1O75312 459 aa13.7□□□□□ -0.22
AMBRA1-211ENST00000533727 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
AMBRA1-211ENST00000533727 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
AMBRA1-211ENST00000533727 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
AMBRA1-211ENST00000533727 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
AMBRA1-211ENST00000533727 ACEP12821 1306 aa13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 TPM4P67936 248 aa13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 HIP1O00291 1037 aa13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 NME9Q86XW9 330 aa13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
AMBRA1-211ENST00000533727 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms