RNA–Protein interactions for RNA: ENST00000533626.5

EIF3F-208, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EIF3F, Length 7,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-208ENST00000533626 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
EIF3F-208ENST00000533626 TTC39AQ5SRH9 613 aa10.86□□□□□ -0.67
EIF3F-208ENST00000533626 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
EIF3F-208ENST00000533626 LRRFIP2Q9Y608 721 aaKnown RBP10.86□□□□□ -0.67
EIF3F-208ENST00000533626 NUCB2P80303 420 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 KIAA0754O94854 1291 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 UBTFL1P0CB47 393 aaPredicted RBP10.85□□□□□ -0.67
EIF3F-208ENST00000533626 PDE3BQ13370 1112 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 KIF6Q6ZMV9 814 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 C22orf23Q9BZE7 217 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 ATF3P18847 181 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 GOLGA6L10A0A0M3HER8 536 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 ZNHIT6Q9NWK9 470 aaKnown RBP10.85□□□□□ -0.67
EIF3F-208ENST00000533626 TNIKQ9UKE5 1360 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 CUX2O14529 1486 aa10.85□□□□□ -0.67
EIF3F-208ENST00000533626 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 FIBPO43427 364 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 CARMIL1Q5VZK9 1371 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 NF2P35240 595 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 ZSCAN29Q8IWY8 852 aaPredicted RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 PANK1Q8TE04 598 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 PSMA5P28066 241 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 SIL1Q9H173 461 aa10.84□□□□□ -0.67
EIF3F-208ENST00000533626 NUTM2BA6NNL0 878 aaPredicted RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 NUTM2EB1AL46 878 aaPredicted RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 NUTM2AQ8IVF1 878 aaPredicted RBP10.84□□□□□ -0.67
EIF3F-208ENST00000533626 ROCK1Q13464 1354 aa10.83□□□□□ -0.68
EIF3F-208ENST00000533626 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
EIF3F-208ENST00000533626 EZRP15311 586 aaKnown RBP10.83□□□□□ -0.68
EIF3F-208ENST00000533626 ERICH4A6NGS2 130 aa10.83□□□□□ -0.68
EIF3F-208ENST00000533626 NFKBIBQ15653 356 aa10.83□□□□□ -0.68
EIF3F-208ENST00000533626 PUS7Q96PZ0 661 aaKnown RBP10.82□□□□□ -0.68
EIF3F-208ENST00000533626 PPFIBP1Q86W92 1011 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC112Q8NEF3 446 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 TSPY26PQ9H489 355 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 STK38Q15208 465 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC113Q9H0I3 377 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 SF3B2Q13435 895 aaKnown RBP10.82□□□□□ -0.68
EIF3F-208ENST00000533626 USP5P45974 858 aa10.82□□□□□ -0.68
EIF3F-208ENST00000533626 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
EIF3F-208ENST00000533626 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
EIF3F-208ENST00000533626 RBM25P49756 843 aaKnown RBP10.81□□□□□ -0.68
EIF3F-208ENST00000533626 ZNF76P36508 570 aa10.81□□□□□ -0.68
EIF3F-208ENST00000533626 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
EIF3F-208ENST00000533626 CARMIL2Q6F5E8 1435 aa10.81□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC69A6NI79 296 aa10.8□□□□□ -0.68
EIF3F-208ENST00000533626 GOLGA6L7A0A1B0GV03 622 aa10.8□□□□□ -0.68
EIF3F-208ENST00000533626 NEK4P51957 841 aa10.8□□□□□ -0.68
EIF3F-208ENST00000533626 ANAPC15P60006 121 aa10.8□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 ME1P48163 572 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 MYL6BP14649 208 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 SERPINA10Q9UK55 444 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 KAT6BQ8WYB5 2073 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 STIM1Q13586 685 aa10.79□□□□□ -0.68
EIF3F-208ENST00000533626 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
EIF3F-208ENST00000533626 FKBP4Q02790 459 aaKnown RBP eCLIP10.78□□□□□ -0.68
EIF3F-208ENST00000533626 DDX54Q8TDD1 881 aaKnown RBP10.78□□□□□ -0.68
EIF3F-208ENST00000533626 TICAM2Q86XR7 235 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 ZNF396Q96N95 335 aaPredicted RBP10.78□□□□□ -0.68
EIF3F-208ENST00000533626 SCLT1Q96NL6 688 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 TRAK2O60296 914 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 SOGA3Q5TF21 947 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC102AQ96A19 550 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
EIF3F-208ENST00000533626 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.68
EIF3F-208ENST00000533626 KIAA1328Q86T90 577 aa10.77□□□□□ -0.68
EIF3F-208ENST00000533626 ERC1Q8IUD2 1116 aa10.77□□□□□ -0.68
EIF3F-208ENST00000533626 CDC45O75419 566 aa10.77□□□□□ -0.68
EIF3F-208ENST00000533626 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.68
EIF3F-208ENST00000533626 DNA2P51530 1060 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 LRRCC1Q9C099 1032 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 TNMDQ9H2S6 317 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 TRMT1LQ7Z2T5 733 aaKnown RBP10.77□□□□□ -0.69
EIF3F-208ENST00000533626 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 TMX1Q9H3N1 280 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 TNNT1P13805 278 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
EIF3F-208ENST00000533626 UBE4AQ14139 1066 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 CFAP45Q9UL16 551 aa10.77□□□□□ -0.69
EIF3F-208ENST00000533626 VGFO15240 615 aaPredicted RBP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 DESP17661 470 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 CEP63Q96MT8 703 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 CCP110O43303 1012 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 LETM1O95202 739 aaPredicted RBP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 LUC7LQ9NQ29 371 aaKnown RBP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 WDR78Q5VTH9 848 aa10.76□□□□□ -0.69
EIF3F-208ENST00000533626 CCDC85AQ96PX6 553 aaPredicted RBP10.76□□□□□ -0.69
EIF3F-208ENST00000533626 RUNDC1Q96C34 613 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms