RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 UPF1Q92900 1129 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■■■■ 40.9
CSRP1-216ENST00000532460 NUDT16Q96DE0 195 aaKnown RBP15.28■□□□□ 0.04
CSRP1-216ENST00000532460 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
CSRP1-216ENST00000532460 RGPD8O14715 1765 aaPredicted RBP15.28■□□□□ 0.04
CSRP1-216ENST00000532460 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
CSRP1-216ENST00000532460 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
CSRP1-216ENST00000532460 ATRNO75882 1429 aa15.27■□□□□ 0.03
CSRP1-216ENST00000532460 LMOD2Q6P5Q4 547 aa15.27■□□□□ 0.03
CSRP1-216ENST00000532460 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.03
CSRP1-216ENST00000532460 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.03
CSRP1-216ENST00000532460 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
CSRP1-216ENST00000532460 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
CSRP1-216ENST00000532460 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
CSRP1-216ENST00000532460 CCDC61Q9Y6R9 512 aa15.26■□□□□ 0.03
CSRP1-216ENST00000532460 RGS12O14924 1447 aa15.25■□□□□ 0.03
CSRP1-216ENST00000532460 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
CSRP1-216ENST00000532460 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
CSRP1-216ENST00000532460 ARHGEF28Q8N1W1 1705 aaKnown RBP15.24■□□□□ 0.03
CSRP1-216ENST00000532460 SLIT2O94813 1529 aa15.24■□□□□ 0.03
CSRP1-216ENST00000532460 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
CSRP1-216ENST00000532460 PER1O15534 1290 aaPredicted RBP15.23■□□□□ 0.03
CSRP1-216ENST00000532460 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
CSRP1-216ENST00000532460 ATP7BP35670 1465 aa15.23■□□□□ 0.03
CSRP1-216ENST00000532460 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
CSRP1-216ENST00000532460 RALBP1Q15311 655 aa15.21■□□□□ 0.03
CSRP1-216ENST00000532460 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.02
CSRP1-216ENST00000532460 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
CSRP1-216ENST00000532460 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
CSRP1-216ENST00000532460 ACEP12821 1306 aa15.2■□□□□ 0.02
CSRP1-216ENST00000532460 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
CSRP1-216ENST00000532460 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
CSRP1-216ENST00000532460 VPS72Q15906 364 aa15.19■□□□□ 0.02
CSRP1-216ENST00000532460 PUS7Q96PZ0 661 aaKnown RBP15.19■□□□□ 0.02
CSRP1-216ENST00000532460 TRPM3Q9HCF6 1732 aaPredicted RBP15.18■□□□□ 0.02
CSRP1-216ENST00000532460 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
CSRP1-216ENST00000532460 PANK3Q9H999 370 aa15.17■□□□□ 0.02
CSRP1-216ENST00000532460 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
CSRP1-216ENST00000532460 MRS2Q9HD23 443 aa15.16■□□□□ 0.02
CSRP1-216ENST00000532460 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
CSRP1-216ENST00000532460 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
CSRP1-216ENST00000532460 BTG4Q9NY30 223 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
CSRP1-216ENST00000532460 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
CSRP1-216ENST00000532460 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 CCDC184Q52MB2 194 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
CSRP1-216ENST00000532460 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
CSRP1-216ENST00000532460 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
CSRP1-216ENST00000532460 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
CSRP1-216ENST00000532460 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
CSRP1-216ENST00000532460 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
CSRP1-216ENST00000532460 CCDC9Q9Y3X0 531 aaKnown RBP15.12■□□□□ 0.01
CSRP1-216ENST00000532460 GLI3P10071 1580 aa15.11■□□□□ 0.01
CSRP1-216ENST00000532460 TOPAZ1Q8N9V7 1692 aa15.11■□□□□ 0.01
CSRP1-216ENST00000532460 ABCA3Q99758 1704 aa15.11■□□□□ 0.01
CSRP1-216ENST00000532460 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
CSRP1-216ENST00000532460 PRDM11Q9NQV5 511 aa15.11■□□□□ 0.01
CSRP1-216ENST00000532460 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
CSRP1-216ENST00000532460 NLRP13Q86W25 1043 aa15.1■□□□□ 0.01
CSRP1-216ENST00000532460 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
CSRP1-216ENST00000532460 KIAA0232Q92628 1395 aa15.09■□□□□ 0.01
CSRP1-216ENST00000532460 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
CSRP1-216ENST00000532460 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0.01
CSRP1-216ENST00000532460 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0.01
CSRP1-216ENST00000532460 TMC1Q8TDI8 760 aa15.08■□□□□ 0.01
CSRP1-216ENST00000532460 USP19O94966 1318 aa15.08■□□□□ 0
CSRP1-216ENST00000532460 GCP02774 474 aa15.08■□□□□ 0
CSRP1-216ENST00000532460 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0
CSRP1-216ENST00000532460 PLCH1Q4KWH8 1693 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 SPATA31A5Q5VU36 1347 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 SPATA31A7Q8IWB4 1347 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 COL14A1Q05707 1796 aaKnown RBP15.07■□□□□ 0
CSRP1-216ENST00000532460 CHRNA2Q15822 529 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
CSRP1-216ENST00000532460 USP6P35125 1406 aa15.07■□□□□ 0
CSRP1-216ENST00000532460 CRYBG1Q9Y4K1 1723 aa15.06■□□□□ 0
CSRP1-216ENST00000532460 SSH2Q76I76 1423 aa15.06■□□□□ 0
CSRP1-216ENST00000532460 FAM98CQ17RN3 349 aaKnown RBP15.06■□□□□ 0
CSRP1-216ENST00000532460 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
CSRP1-216ENST00000532460 CPDO75976 1380 aa15.05■□□□□ 0
CSRP1-216ENST00000532460 NLRP6P59044 892 aa15.05■□□□□ -0
CSRP1-216ENST00000532460 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
CSRP1-216ENST00000532460 FAM9BQ8IZU0 186 aa15.05■□□□□ -0
CSRP1-216ENST00000532460 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
CSRP1-216ENST00000532460 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
CSRP1-216ENST00000532460 NINLQ9Y2I6 1382 aa15.03■□□□□ -0
CSRP1-216ENST00000532460 NRAPQ86VF7 1730 aa15.03■□□□□ -0
CSRP1-216ENST00000532460 EVA1CP58658 441 aa15.02■□□□□ -0
CSRP1-216ENST00000532460 STRN4Q9NRL3 753 aa15.02■□□□□ -0
CSRP1-216ENST00000532460 INSRP06213 1382 aa15.02■□□□□ -0
CSRP1-216ENST00000532460 CPSF1Q10570 1443 aaKnown RBP15.02□□□□□ -0.01
CSRP1-216ENST00000532460 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
CSRP1-216ENST00000532460 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
CSRP1-216ENST00000532460 TTC21BQ7Z4L5 1316 aa15.01□□□□□ -0.01
CSRP1-216ENST00000532460 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
CSRP1-216ENST00000532460 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms