RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
VPS26B-207ENST00000532160 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
VPS26B-207ENST00000532160 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
VPS26B-207ENST00000532160 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
VPS26B-207ENST00000532160 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
VPS26B-207ENST00000532160 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
VPS26B-207ENST00000532160 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-207ENST00000532160 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
VPS26B-207ENST00000532160 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
VPS26B-207ENST00000532160 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
VPS26B-207ENST00000532160 EIF3AQ14152 1382 aaKnown RBP13.56□□□□□ -0.24
VPS26B-207ENST00000532160 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
VPS26B-207ENST00000532160 ATP7BP35670 1465 aa13.55□□□□□ -0.24
VPS26B-207ENST00000532160 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
VPS26B-207ENST00000532160 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
VPS26B-207ENST00000532160 ITSN1Q15811 1721 aa13.55□□□□□ -0.24
VPS26B-207ENST00000532160 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
VPS26B-207ENST00000532160 A0A0G2JS52 829 aa13.53□□□□□ -0.24
VPS26B-207ENST00000532160 MYT1Q01538 1121 aa13.53□□□□□ -0.24
VPS26B-207ENST00000532160 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
VPS26B-207ENST00000532160 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
VPS26B-207ENST00000532160 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
VPS26B-207ENST00000532160 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
VPS26B-207ENST00000532160 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
VPS26B-207ENST00000532160 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
VPS26B-207ENST00000532160 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
VPS26B-207ENST00000532160 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
VPS26B-207ENST00000532160 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
VPS26B-207ENST00000532160 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
VPS26B-207ENST00000532160 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
VPS26B-207ENST00000532160 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
VPS26B-207ENST00000532160 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
VPS26B-207ENST00000532160 KIAA1210Q9ULL0 1709 aa13.48□□□□□ -0.25
VPS26B-207ENST00000532160 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
VPS26B-207ENST00000532160 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
VPS26B-207ENST00000532160 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
VPS26B-207ENST00000532160 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
VPS26B-207ENST00000532160 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
VPS26B-207ENST00000532160 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
VPS26B-207ENST00000532160 BAG6P46379 1132 aa13.46□□□□□ -0.25
VPS26B-207ENST00000532160 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
VPS26B-207ENST00000532160 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
VPS26B-207ENST00000532160 LRP5O75197 1615 aa13.46□□□□□ -0.26
VPS26B-207ENST00000532160 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
VPS26B-207ENST00000532160 ACEP12821 1306 aa13.45□□□□□ -0.26
VPS26B-207ENST00000532160 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
VPS26B-207ENST00000532160 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
VPS26B-207ENST00000532160 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
VPS26B-207ENST00000532160 STRN4Q9NRL3 753 aa13.45□□□□□ -0.26
VPS26B-207ENST00000532160 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
VPS26B-207ENST00000532160 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
VPS26B-207ENST00000532160 NBPF8Q3BBV2 869 aa13.44□□□□□ -0.26
VPS26B-207ENST00000532160 L3MBTL2Q969R5 705 aa13.44□□□□□ -0.26
VPS26B-207ENST00000532160 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
VPS26B-207ENST00000532160 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
VPS26B-207ENST00000532160 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
VPS26B-207ENST00000532160 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
VPS26B-207ENST00000532160 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
VPS26B-207ENST00000532160 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
VPS26B-207ENST00000532160 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
VPS26B-207ENST00000532160 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
VPS26B-207ENST00000532160 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
VPS26B-207ENST00000532160 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
VPS26B-207ENST00000532160 USP19O94966 1318 aa13.4□□□□□ -0.26
VPS26B-207ENST00000532160 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
VPS26B-207ENST00000532160 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
VPS26B-207ENST00000532160 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
VPS26B-207ENST00000532160 TRIM37O94972 964 aa13.39□□□□□ -0.27
VPS26B-207ENST00000532160 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
VPS26B-207ENST00000532160 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
VPS26B-207ENST00000532160 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
VPS26B-207ENST00000532160 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
VPS26B-207ENST00000532160 CPDO75976 1380 aa13.39□□□□□ -0.27
VPS26B-207ENST00000532160 EVA1CP58658 441 aa13.38□□□□□ -0.27
VPS26B-207ENST00000532160 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
VPS26B-207ENST00000532160 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
VPS26B-207ENST00000532160 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
VPS26B-207ENST00000532160 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
VPS26B-207ENST00000532160 GCP02774 474 aa13.36□□□□□ -0.27
VPS26B-207ENST00000532160 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
VPS26B-207ENST00000532160 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
VPS26B-207ENST00000532160 RREB1Q92766 1687 aa13.35□□□□□ -0.27
VPS26B-207ENST00000532160 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
VPS26B-207ENST00000532160 TCP11L2Q8N4U5 519 aa13.35□□□□□ -0.27
VPS26B-207ENST00000532160 USP6P35125 1406 aa13.35□□□□□ -0.27
VPS26B-207ENST00000532160 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
VPS26B-207ENST00000532160 APBA3O96018 575 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 SLIT3O75094 1523 aa13.34□□□□□ -0.27
VPS26B-207ENST00000532160 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
VPS26B-207ENST00000532160 ZBTB7CA1YPR0 619 aa13.32□□□□□ -0.28
VPS26B-207ENST00000532160 COL18A1P39060 1754 aa13.32□□□□□ -0.28
VPS26B-207ENST00000532160 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
VPS26B-207ENST00000532160 CRB1P82279 1406 aa13.31□□□□□ -0.28
VPS26B-207ENST00000532160 PEAK1Q9H792 1746 aa13.31□□□□□ -0.28
VPS26B-207ENST00000532160 NLRP6P59044 892 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms