RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 API5Q9BZZ5 524 aaKnown RBP14.03□□□□□ -0.16
NXF1-211ENST00000531709 PTPRTO14522 1441 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
NXF1-211ENST00000531709 CDC42BPBQ9Y5S2 1711 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 FCHSD2O94868 740 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
NXF1-211ENST00000531709 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
NXF1-211ENST00000531709 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
NXF1-211ENST00000531709 PLCB2Q00722 1185 aa14.02□□□□□ -0.16
NXF1-211ENST00000531709 CDC45O75419 566 aa14.02□□□□□ -0.17
NXF1-211ENST00000531709 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
NXF1-211ENST00000531709 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
NXF1-211ENST00000531709 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
NXF1-211ENST00000531709 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
NXF1-211ENST00000531709 ARID3AQ99856 593 aa14.01□□□□□ -0.17
NXF1-211ENST00000531709 ST18O60284 1047 aa14.01□□□□□ -0.17
NXF1-211ENST00000531709 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
NXF1-211ENST00000531709 ANKRD36BQ8N2N9 1353 aa14□□□□□ -0.17
NXF1-211ENST00000531709 FAM83GA6ND36 823 aa14□□□□□ -0.17
NXF1-211ENST00000531709 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
NXF1-211ENST00000531709 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
NXF1-211ENST00000531709 TSPYL6Q8N831 410 aa14□□□□□ -0.17
NXF1-211ENST00000531709 RILPL2Q969X0 211 aa14□□□□□ -0.17
NXF1-211ENST00000531709 PTMSP20962 102 aa14□□□□□ -0.17
NXF1-211ENST00000531709 NUCB1Q02818 461 aa14□□□□□ -0.17
NXF1-211ENST00000531709 TXNDC2Q86VQ3 553 aa14□□□□□ -0.17
NXF1-211ENST00000531709 RRAGDQ9NQL2 400 aaPredicted RBP14□□□□□ -0.17
NXF1-211ENST00000531709 SYNMO15061 1565 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 NFE2L2Q16236 605 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 DNTTIP2Q5QJE6 756 aaKnown RBP13.99□□□□□ -0.17
NXF1-211ENST00000531709 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
NXF1-211ENST00000531709 TBC1D9Q6ZT07 1266 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 SMC5Q8IY18 1101 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 ERCC6L2Q5T890 1561 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 CAVIN1Q6NZI2 390 aaKnown RBP13.99□□□□□ -0.17
NXF1-211ENST00000531709 PHACTR3Q96KR7 559 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
NXF1-211ENST00000531709 NME9Q86XW9 330 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 IQGAP3Q86VI3 1631 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 SSFA2P28290 1259 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 HMMRO75330 724 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
NXF1-211ENST00000531709 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
NXF1-211ENST00000531709 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 SMARCA5O60264 1052 aaPredicted RBP13.97□□□□□ -0.17
NXF1-211ENST00000531709 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 E9PCH4 1651 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
NXF1-211ENST00000531709 STK31Q9BXU1 1019 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
NXF1-211ENST00000531709 KDM5AP29375 1690 aaKnown RBP13.97□□□□□ -0.17
NXF1-211ENST00000531709 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.17
NXF1-211ENST00000531709 UNC13BO14795 1591 aa13.96□□□□□ -0.17
NXF1-211ENST00000531709 ESPNB1AK53 854 aa13.96□□□□□ -0.17
NXF1-211ENST00000531709 BMP2KLQ5H9B9 411 aa13.96□□□□□ -0.17
NXF1-211ENST00000531709 MCCP23508 829 aa13.96□□□□□ -0.17
NXF1-211ENST00000531709 MBIPQ9NS73 344 aa13.96□□□□□ -0.17
NXF1-211ENST00000531709 CD109Q6YHK3 1445 aa13.96□□□□□ -0.18
NXF1-211ENST00000531709 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.18
NXF1-211ENST00000531709 OSCARQ8IYS5 282 aa13.96□□□□□ -0.18
NXF1-211ENST00000531709 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.18
NXF1-211ENST00000531709 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
NXF1-211ENST00000531709 TRPM2O94759 1503 aa13.95□□□□□ -0.18
NXF1-211ENST00000531709 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
NXF1-211ENST00000531709 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
NXF1-211ENST00000531709 C16orf71Q8IYS4 520 aaPredicted RBP13.95□□□□□ -0.18
NXF1-211ENST00000531709 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 NSD2O96028 1365 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 MCM10Q7L590 875 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 REC8O95072 547 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
NXF1-211ENST00000531709 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 POLKQ9UBT6 870 aa13.94□□□□□ -0.18
NXF1-211ENST00000531709 RNF214Q8ND24 703 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 VAMP4O75379 141 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 NUCB2P80303 420 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 AMPHP49418 695 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 NEK4P51957 841 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
NXF1-211ENST00000531709 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
NXF1-211ENST00000531709 RABEP1Q15276 862 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 IL16Q14005 1332 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 KRT24Q2M2I5 525 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 CLTCL1P53675 1640 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 MADDQ8WXG6 1647 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
NXF1-211ENST00000531709 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 ABCC1P33527 1531 aa13.92□□□□□ -0.18
NXF1-211ENST00000531709 ZNF428Q96B54 188 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms