RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	TNS3	Q68CZ2	1445 aa		29.44	■■■□□ 2.3
PABPC4-225	ENST00000531243	SPATA31A3	Q5VYP0	1347 aa		29.43	■■■□□ 2.3
PABPC4-225	ENST00000531243		A0A1W2PP64	1363 aa		29.42	■■■□□ 2.3
PABPC4-225	ENST00000531243	ARHGEF10	O15013	1369 aa		29.42	■■■□□ 2.3
PABPC4-225	ENST00000531243	CCDC7	Q96M83	1385 aa		29.42	■■■□□ 2.3
PABPC4-225	ENST00000531243	CD163L1	Q9NR16	1453 aa		29.42	■■■□□ 2.3
PABPC4-225	ENST00000531243	LMOD2	Q6P5Q4	547 aa		29.41	■■■□□ 2.3
PABPC4-225	ENST00000531243	ALS2	Q96Q42	1657 aa		29.4	■■■□□ 2.3
PABPC4-225	ENST00000531243	TTC21A	Q8NDW8	1320 aa		29.39	■■■□□ 2.3
PABPC4-225	ENST00000531243	EDC4	Q6P2E9	1401 aa	Known RBP	29.38	■■■□□ 2.29
PABPC4-225	ENST00000531243	WASHC2A	Q641Q2	1341 aa		29.38	■■■□□ 2.29
PABPC4-225	ENST00000531243	NRK	Q7Z2Y5	1582 aa		29.38	■■■□□ 2.29
PABPC4-225	ENST00000531243	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.36	■■■□□ 2.29
PABPC4-225	ENST00000531243	PNPLA6	Q8IY17	1366 aa		29.36	■■■□□ 2.29
PABPC4-225	ENST00000531243	ABTB2	Q8N961	1025 aa		29.35	■■■□□ 2.29
PABPC4-225	ENST00000531243	SPATA31A6	Q5VVP1	1343 aa		29.35	■■■□□ 2.29
PABPC4-225	ENST00000531243	TTC21B	Q7Z4L5	1316 aa		29.35	■■■□□ 2.29
PABPC4-225	ENST00000531243	SSH2	Q76I76	1423 aa		29.34	■■■□□ 2.29
PABPC4-225	ENST00000531243	NLRP13	Q86W25	1043 aa		29.31	■■■□□ 2.28
PABPC4-225	ENST00000531243	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29.3	■■■□□ 2.28
PABPC4-225	ENST00000531243	PANK3	Q9H999	370 aa		29.3	■■■□□ 2.28
PABPC4-225	ENST00000531243	HAP1	P54257	671 aa	Predicted RBP	29.29	■■■□□ 2.28
PABPC4-225	ENST00000531243	KIF20B	Q96Q89	1820 aa		29.28	■■■□□ 2.28
PABPC4-225	ENST00000531243	PIK3C2A	O00443	1686 aa		29.28	■■■□□ 2.28
PABPC4-225	ENST00000531243	NSD3	Q9BZ95	1437 aa		29.27	■■■□□ 2.28
PABPC4-225	ENST00000531243	MED1	Q15648	1581 aa	Predicted RBP	29.26	■■■□□ 2.28
PABPC4-225	ENST00000531243	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.26	■■■□□ 2.27
PABPC4-225	ENST00000531243	NLRP6	P59044	892 aa		29.26	■■■□□ 2.27
PABPC4-225	ENST00000531243	KNSTRN	Q9Y448	316 aa		29.24	■■■□□ 2.27
PABPC4-225	ENST00000531243	CGNL1	Q0VF96	1302 aa		29.23	■■■□□ 2.27
PABPC4-225	ENST00000531243	ABCA3	Q99758	1704 aa		29.23	■■■□□ 2.27
PABPC4-225	ENST00000531243	NUTM2G	Q5VZR2	741 aa		29.23	■■■□□ 2.27
PABPC4-225	ENST00000531243	USP54	Q70EL1	1684 aa		29.23	■■■□□ 2.27
PABPC4-225	ENST00000531243	NUTM2B	A6NNL0	878 aa	Predicted RBP	29.22	■■■□□ 2.27
PABPC4-225	ENST00000531243	NUTM2E	B1AL46	878 aa	Predicted RBP	29.22	■■■□□ 2.27
PABPC4-225	ENST00000531243	NUTM2A	Q8IVF1	878 aa	Predicted RBP	29.22	■■■□□ 2.27
PABPC4-225	ENST00000531243	CARD14	Q9BXL6	1004 aa		29.22	■■■□□ 2.27
PABPC4-225	ENST00000531243	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.21	■■■□□ 2.27
PABPC4-225	ENST00000531243	CRYBG1	Q9Y4K1	1723 aa		29.21	■■■□□ 2.27
PABPC4-225	ENST00000531243	USP31	Q70CQ4	1352 aa		29.21	■■■□□ 2.27
PABPC4-225	ENST00000531243	MARF1	Q9Y4F3	1742 aa	Known RBP	29.2	■■■□□ 2.27
PABPC4-225	ENST00000531243	NME9	Q86XW9	330 aa		29.2	■■■□□ 2.26
PABPC4-225	ENST00000531243	PLEKHG5	O94827	1062 aa		29.19	■■■□□ 2.26
PABPC4-225	ENST00000531243	COG3	Q96JB2	828 aa		29.19	■■■□□ 2.26
PABPC4-225	ENST00000531243	MEX3C	Q5U5Q3	659 aa	Known RBP	29.18	■■■□□ 2.26
PABPC4-225	ENST00000531243	KCNH5	Q8NCM2	988 aa		29.18	■■■□□ 2.26
PABPC4-225	ENST00000531243	USP19	O94966	1318 aa		29.18	■■■□□ 2.26
PABPC4-225	ENST00000531243	CABLES1	Q8TDN4	633 aa		29.17	■■■□□ 2.26
PABPC4-225	ENST00000531243	FYB1	O15117	783 aa		29.16	■■■□□ 2.26
PABPC4-225	ENST00000531243	ANKRD26	Q9UPS8	1709 aa		29.16	■■■□□ 2.26
PABPC4-225	ENST00000531243	NSD2	O96028	1365 aa		29.15	■■■□□ 2.26
PABPC4-225	ENST00000531243	SLIT3	O75094	1523 aa		29.15	■■■□□ 2.26
PABPC4-225	ENST00000531243	OVOS2	A0A0J9YW53	1432 aa		29.12	■■■□□ 2.25
PABPC4-225	ENST00000531243	OVOS2	Q6IE36	1432 aa		29.12	■■■□□ 2.25
PABPC4-225	ENST00000531243	GC	P02774	474 aa		29.12	■■■□□ 2.25
PABPC4-225	ENST00000531243	GGNBP2	Q9H3C7	697 aa		29.12	■■■□□ 2.25
PABPC4-225	ENST00000531243	ADAMTS2	O95450	1211 aa		29.11	■■■□□ 2.25
PABPC4-225	ENST00000531243	LRP6	O75581	1613 aa		29.11	■■■□□ 2.25
PABPC4-225	ENST00000531243	PER1	O15534	1290 aa	Predicted RBP	29.1	■■■□□ 2.25
PABPC4-225	ENST00000531243	DDX10	Q13206	875 aa	Known RBP	29.09	■■■□□ 2.25
PABPC4-225	ENST00000531243	ZRANB1	Q9UGI0	708 aa		29.09	■■■□□ 2.25
PABPC4-225	ENST00000531243	COL14A1	Q05707	1796 aa	Known RBP	29.06	■■■□□ 2.24
PABPC4-225	ENST00000531243	ZC3H6	P61129	1189 aa	Known RBP	29.05	■■■□□ 2.24
PABPC4-225	ENST00000531243	CPD	O75976	1380 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	NPC1L1	Q9UHC9	1359 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	SOX12	O15370	315 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	NGLY1	Q96IV0	654 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	C8orf37	Q96NL8	207 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	PRDM11	Q9NQV5	511 aa		29.04	■■■□□ 2.24
PABPC4-225	ENST00000531243	LTN1	O94822	1766 aa		29.03	■■■□□ 2.24
PABPC4-225	ENST00000531243	AMER1	Q5JTC6	1135 aa	Predicted RBP	29.03	■■■□□ 2.24
PABPC4-225	ENST00000531243	MORC1	Q86VD1	984 aa		29.02	■■■□□ 2.24
PABPC4-225	ENST00000531243	KIAA0232	Q92628	1395 aa		29.01	■■■□□ 2.24
PABPC4-225	ENST00000531243	NFAT5	O94916	1531 aa		29.01	■■■□□ 2.23
PABPC4-225	ENST00000531243	NWD2	Q9ULI1	1742 aa		29	■■■□□ 2.23
PABPC4-225	ENST00000531243	MAP2	P11137	1827 aa	Known RBP	29	■■■□□ 2.23
PABPC4-225	ENST00000531243	PLCH1	Q4KWH8	1693 aa		28.99	■■■□□ 2.23
PABPC4-225	ENST00000531243	ZBTB7C	A1YPR0	619 aa		28.99	■■■□□ 2.23
PABPC4-225	ENST00000531243	CC2D1B	Q5T0F9	858 aa	Known RBP	28.98	■■■□□ 2.23
PABPC4-225	ENST00000531243	ARHGEF25	Q86VW2	580 aa		28.97	■■■□□ 2.23
PABPC4-225	ENST00000531243	ABCC6	O95255	1503 aa		28.96	■■■□□ 2.23
PABPC4-225	ENST00000531243	FAM83G	A6ND36	823 aa		28.96	■■■□□ 2.23
PABPC4-225	ENST00000531243	AATK	Q6ZMQ8	1374 aa		28.95	■■■□□ 2.22
PABPC4-225	ENST00000531243	ZNF772	Q68DY9	489 aa	Predicted RBP	28.94	■■■□□ 2.22
PABPC4-225	ENST00000531243	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.94	■■■□□ 2.22
PABPC4-225	ENST00000531243	AFF2	P51816	1311 aa		28.94	■■■□□ 2.22
PABPC4-225	ENST00000531243	CHRNA2	Q15822	529 aa		28.93	■■■□□ 2.22
PABPC4-225	ENST00000531243	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.93	■■■□□ 2.22
PABPC4-225	ENST00000531243	SLIT2	O94813	1529 aa		28.93	■■■□□ 2.22
PABPC4-225	ENST00000531243	AMPH	P49418	695 aa		28.92	■■■□□ 2.22
PABPC4-225	ENST00000531243	USP21	Q9UK80	565 aa		28.92	■■■□□ 2.22
PABPC4-225	ENST00000531243	KIF24	Q5T7B8	1368 aa		28.91	■■■□□ 2.22
PABPC4-225	ENST00000531243	CNGB1	Q14028	1251 aa	Predicted RBP	28.91	■■■□□ 2.22
PABPC4-225	ENST00000531243	BTG4	Q9NY30	223 aa		28.91	■■■□□ 2.22
PABPC4-225	ENST00000531243	COL18A1	P39060	1754 aa		28.9	■■■□□ 2.22
PABPC4-225	ENST00000531243	LMO7	Q8WWI1	1683 aa		28.9	■■■□□ 2.22
PABPC4-225	ENST00000531243	TNNT2	P45379	298 aa	Predicted RBP	28.9	■■■□□ 2.22
PABPC4-225	ENST00000531243	RGPD5	Q99666	1765 aa		28.9	■■■□□ 2.22
PABPC4-225	ENST00000531243	RTL1	A6NKG5	1358 aa		28.89	■■■□□ 2.22
PABPC4-225	ENST00000531243	MAP3K19	Q56UN5	1328 aa		28.89	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms