RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
VPS51-210ENST00000531146 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
VPS51-210ENST00000531146 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
VPS51-210ENST00000531146 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
VPS51-210ENST00000531146 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
VPS51-210ENST00000531146 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
VPS51-210ENST00000531146 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
VPS51-210ENST00000531146 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
VPS51-210ENST00000531146 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
VPS51-210ENST00000531146 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
VPS51-210ENST00000531146 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
VPS51-210ENST00000531146 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
VPS51-210ENST00000531146 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
VPS51-210ENST00000531146 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
VPS51-210ENST00000531146 A0A0G2JS52 829 aa17.38■□□□□ 0.37
VPS51-210ENST00000531146 MYT1Q01538 1121 aa17.38■□□□□ 0.37
VPS51-210ENST00000531146 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
VPS51-210ENST00000531146 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
VPS51-210ENST00000531146 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
VPS51-210ENST00000531146 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
VPS51-210ENST00000531146 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
VPS51-210ENST00000531146 ACEP12821 1306 aa17.37■□□□□ 0.37
VPS51-210ENST00000531146 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
VPS51-210ENST00000531146 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
VPS51-210ENST00000531146 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
VPS51-210ENST00000531146 NBPF8Q3BBV2 869 aa17.36■□□□□ 0.37
VPS51-210ENST00000531146 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
VPS51-210ENST00000531146 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
VPS51-210ENST00000531146 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
VPS51-210ENST00000531146 ZC3H6P61129 1189 aaKnown RBP17.34■□□□□ 0.37
VPS51-210ENST00000531146 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
VPS51-210ENST00000531146 THSD7AQ9UPZ6 1657 aa17.34■□□□□ 0.37
VPS51-210ENST00000531146 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
VPS51-210ENST00000531146 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
VPS51-210ENST00000531146 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
VPS51-210ENST00000531146 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
VPS51-210ENST00000531146 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
VPS51-210ENST00000531146 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
VPS51-210ENST00000531146 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
VPS51-210ENST00000531146 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
VPS51-210ENST00000531146 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
VPS51-210ENST00000531146 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
VPS51-210ENST00000531146 USP19O94966 1318 aa17.28■□□□□ 0.36
VPS51-210ENST00000531146 BAG6P46379 1132 aa17.28■□□□□ 0.36
VPS51-210ENST00000531146 CAMTA1Q9Y6Y1 1673 aa17.27■□□□□ 0.36
VPS51-210ENST00000531146 EN1Q05925 392 aaPredicted RBP17.27■□□□□ 0.36
VPS51-210ENST00000531146 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
VPS51-210ENST00000531146 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
VPS51-210ENST00000531146 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
VPS51-210ENST00000531146 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
VPS51-210ENST00000531146 CPDO75976 1380 aa17.26■□□□□ 0.35
VPS51-210ENST00000531146 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
VPS51-210ENST00000531146 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
VPS51-210ENST00000531146 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
VPS51-210ENST00000531146 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
VPS51-210ENST00000531146 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
VPS51-210ENST00000531146 GCP02774 474 aa17.24■□□□□ 0.35
VPS51-210ENST00000531146 EVA1CP58658 441 aa17.24■□□□□ 0.35
VPS51-210ENST00000531146 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
VPS51-210ENST00000531146 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
VPS51-210ENST00000531146 DISP2A7MBM2 1401 aa17.22■□□□□ 0.35
VPS51-210ENST00000531146 USP6P35125 1406 aa17.22■□□□□ 0.35
VPS51-210ENST00000531146 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
VPS51-210ENST00000531146 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
VPS51-210ENST00000531146 TRIM37O94972 964 aa17.21■□□□□ 0.35
VPS51-210ENST00000531146 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
VPS51-210ENST00000531146 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
VPS51-210ENST00000531146 EZH2Q15910 746 aaKnown RBP17.2■□□□□ 0.34
VPS51-210ENST00000531146 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
VPS51-210ENST00000531146 LRP5O75197 1615 aa17.2■□□□□ 0.34
VPS51-210ENST00000531146 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
VPS51-210ENST00000531146 NLRP6P59044 892 aa17.19■□□□□ 0.34
VPS51-210ENST00000531146 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
VPS51-210ENST00000531146 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
VPS51-210ENST00000531146 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
VPS51-210ENST00000531146 SLIT3O75094 1523 aa17.18■□□□□ 0.34
VPS51-210ENST00000531146 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
VPS51-210ENST00000531146 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
VPS51-210ENST00000531146 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
VPS51-210ENST00000531146 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
VPS51-210ENST00000531146 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
VPS51-210ENST00000531146 CCER1Q8TC90 406 aaPredicted RBP17.16■□□□□ 0.34
VPS51-210ENST00000531146 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
VPS51-210ENST00000531146 APBA3O96018 575 aa17.15■□□□□ 0.34
VPS51-210ENST00000531146 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
VPS51-210ENST00000531146 COL18A1P39060 1754 aa17.15■□□□□ 0.34
VPS51-210ENST00000531146 CRB1P82279 1406 aa17.14■□□□□ 0.33
VPS51-210ENST00000531146 PARP4Q9UKK3 1724 aaKnown RBP17.14■□□□□ 0.33
VPS51-210ENST00000531146 AKAP12Q02952 1782 aa17.13■□□□□ 0.33
VPS51-210ENST00000531146 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
VPS51-210ENST00000531146 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
VPS51-210ENST00000531146 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
VPS51-210ENST00000531146 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
VPS51-210ENST00000531146 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
VPS51-210ENST00000531146 RREB1Q92766 1687 aa17.1■□□□□ 0.33
VPS51-210ENST00000531146 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
VPS51-210ENST00000531146 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
VPS51-210ENST00000531146 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
VPS51-210ENST00000531146 SOX12O15370 315 aa17.09■□□□□ 0.33
VPS51-210ENST00000531146 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms