RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ACEP12821 1306 aa20.54■□□□□ 0.88
SRPRA-204ENST00000530680 MON2Q7Z3U7 1717 aa20.54■□□□□ 0.88
SRPRA-204ENST00000530680 XPCQ01831 940 aaPredicted RBP20.54■□□□□ 0.88
SRPRA-204ENST00000530680 TERF2IPQ9NYB0 399 aa20.53■□□□□ 0.88
SRPRA-204ENST00000530680 PXDNQ92626 1479 aa20.52■□□□□ 0.88
SRPRA-204ENST00000530680 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
SRPRA-204ENST00000530680 PLEKHG3A1L390 1219 aa20.52■□□□□ 0.88
SRPRA-204ENST00000530680 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.88
SRPRA-204ENST00000530680 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
SRPRA-204ENST00000530680 TRPM3Q9HCF6 1732 aaPredicted RBP20.5■□□□□ 0.87
SRPRA-204ENST00000530680 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
SRPRA-204ENST00000530680 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
SRPRA-204ENST00000530680 NGLY1Q96IV0 654 aa20.5■□□□□ 0.87
SRPRA-204ENST00000530680 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
SRPRA-204ENST00000530680 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
SRPRA-204ENST00000530680 SLC12A5Q9H2X9 1139 aa20.49■□□□□ 0.87
SRPRA-204ENST00000530680 USP6P35125 1406 aa20.48■□□□□ 0.87
SRPRA-204ENST00000530680 TNS3Q68CZ2 1445 aa20.48■□□□□ 0.87
SRPRA-204ENST00000530680 SOS2Q07890 1332 aaPredicted RBP20.48■□□□□ 0.87
SRPRA-204ENST00000530680 CCDC7Q96M83 1385 aa20.47■□□□□ 0.87
SRPRA-204ENST00000530680 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
SRPRA-204ENST00000530680 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
SRPRA-204ENST00000530680 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
SRPRA-204ENST00000530680 SBNO1A3KN83 1393 aa20.46■□□□□ 0.87
SRPRA-204ENST00000530680 ANKRD36BQ8N2N9 1353 aa20.46■□□□□ 0.87
SRPRA-204ENST00000530680 SRCAPQ6ZRS2 3230 aa20.46■□□□□ 0.87
SRPRA-204ENST00000530680 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
SRPRA-204ENST00000530680 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.86
SRPRA-204ENST00000530680 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
SRPRA-204ENST00000530680 BRD4O60885 1362 aaPredicted RBP20.45■□□□□ 0.86
SRPRA-204ENST00000530680 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
SRPRA-204ENST00000530680 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
SRPRA-204ENST00000530680 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
SRPRA-204ENST00000530680 USP21Q9UK80 565 aa20.44■□□□□ 0.86
SRPRA-204ENST00000530680 CD163L1Q9NR16 1453 aa20.43■□□□□ 0.86
SRPRA-204ENST00000530680 TRPC5Q9UL62 973 aaPredicted RBP20.43■□□□□ 0.86
SRPRA-204ENST00000530680 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
SRPRA-204ENST00000530680 EDC4Q6P2E9 1401 aaKnown RBP20.43■□□□□ 0.86
SRPRA-204ENST00000530680 PLEKHG5O94827 1062 aa20.42■□□□□ 0.86
SRPRA-204ENST00000530680 HAP1P54257 671 aaPredicted RBP20.42■□□□□ 0.86
SRPRA-204ENST00000530680 SPATA31A3Q5VYP0 1347 aa20.42■□□□□ 0.86
SRPRA-204ENST00000530680 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
SRPRA-204ENST00000530680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
SRPRA-204ENST00000530680 ABTB2Q8N961 1025 aa20.4■□□□□ 0.86
SRPRA-204ENST00000530680 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
SRPRA-204ENST00000530680 MARF1Q9Y4F3 1742 aaKnown RBP20.4■□□□□ 0.86
SRPRA-204ENST00000530680 ATRNO75882 1429 aa20.39■□□□□ 0.85
SRPRA-204ENST00000530680 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
SRPRA-204ENST00000530680 FNBP4Q8N3X1 1017 aaPredicted RBP20.39■□□□□ 0.85
SRPRA-204ENST00000530680 ABCA3Q99758 1704 aa20.39■□□□□ 0.85
SRPRA-204ENST00000530680 EP400Q96L91 3159 aa20.38■□□□□ 0.85
SRPRA-204ENST00000530680 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
SRPRA-204ENST00000530680 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
SRPRA-204ENST00000530680 NUTM2GQ5VZR2 741 aa20.36■□□□□ 0.85
SRPRA-204ENST00000530680 PANK3Q9H999 370 aa20.36■□□□□ 0.85
SRPRA-204ENST00000530680 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
SRPRA-204ENST00000530680 NLRP6P59044 892 aa20.34■□□□□ 0.85
SRPRA-204ENST00000530680 NLRP13Q86W25 1043 aa20.34■□□□□ 0.85
SRPRA-204ENST00000530680 ZRANB1Q9UGI0 708 aa20.34■□□□□ 0.85
SRPRA-204ENST00000530680 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
SRPRA-204ENST00000530680 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
SRPRA-204ENST00000530680 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.85
SRPRA-204ENST00000530680 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.84
SRPRA-204ENST00000530680 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
SRPRA-204ENST00000530680 USP54Q70EL1 1684 aa20.32■□□□□ 0.84
SRPRA-204ENST00000530680 BCL9LQ86UU0 1499 aa20.31■□□□□ 0.84
SRPRA-204ENST00000530680 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.31■□□□□ 0.84
SRPRA-204ENST00000530680 NME9Q86XW9 330 aa20.31■□□□□ 0.84
SRPRA-204ENST00000530680 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
SRPRA-204ENST00000530680 COG3Q96JB2 828 aa20.3■□□□□ 0.84
SRPRA-204ENST00000530680 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
SRPRA-204ENST00000530680 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
SRPRA-204ENST00000530680 SOX12O15370 315 aa20.27■□□□□ 0.84
SRPRA-204ENST00000530680 SLIT3O75094 1523 aa20.27■□□□□ 0.83
SRPRA-204ENST00000530680 NSD2O96028 1365 aa20.26■□□□□ 0.83
SRPRA-204ENST00000530680 ZBTB7CA1YPR0 619 aa20.26■□□□□ 0.83
SRPRA-204ENST00000530680 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
SRPRA-204ENST00000530680 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
SRPRA-204ENST00000530680 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
SRPRA-204ENST00000530680 KCNH5Q8NCM2 988 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 LTN1O94822 1766 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 USP19O94966 1318 aa20.25■□□□□ 0.83
SRPRA-204ENST00000530680 GLI3P10071 1580 aa20.23■□□□□ 0.83
SRPRA-204ENST00000530680 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
SRPRA-204ENST00000530680 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
SRPRA-204ENST00000530680 COL14A1Q05707 1796 aaKnown RBP20.22■□□□□ 0.83
SRPRA-204ENST00000530680 FYB1O15117 783 aa20.22■□□□□ 0.83
SRPRA-204ENST00000530680 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
SRPRA-204ENST00000530680 PRDM11Q9NQV5 511 aa20.21■□□□□ 0.83
SRPRA-204ENST00000530680 SLIT2O94813 1529 aa20.21■□□□□ 0.83
SRPRA-204ENST00000530680 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
SRPRA-204ENST00000530680 GCP02774 474 aa20.2■□□□□ 0.82
SRPRA-204ENST00000530680 ZC3H6P61129 1189 aaKnown RBP20.2■□□□□ 0.82
SRPRA-204ENST00000530680 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
SRPRA-204ENST00000530680 NFAT5O94916 1531 aa20.19■□□□□ 0.82
SRPRA-204ENST00000530680 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
SRPRA-204ENST00000530680 KIAA0232Q92628 1395 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms