RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
C11orf54-209ENST00000530620 TNS3Q68CZ2 1445 aa15.77■□□□□ 0.12
C11orf54-209ENST00000530620 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
C11orf54-209ENST00000530620 SPATA31A3Q5VYP0 1347 aa15.77■□□□□ 0.12
C11orf54-209ENST00000530620 EP400Q96L91 3159 aa15.77■□□□□ 0.12
C11orf54-209ENST00000530620 ARHGEF28Q8N1W1 1705 aaKnown RBP15.77■□□□□ 0.11
C11orf54-209ENST00000530620 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
C11orf54-209ENST00000530620 SLIT2O94813 1529 aa15.76■□□□□ 0.11
C11orf54-209ENST00000530620 SAFB2Q14151 953 aaKnown RBP eCLIP15.75■□□□□ 0.11
C11orf54-209ENST00000530620 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
C11orf54-209ENST00000530620 ALS2Q96Q42 1657 aa15.75■□□□□ 0.11
C11orf54-209ENST00000530620 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
C11orf54-209ENST00000530620 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
C11orf54-209ENST00000530620 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
C11orf54-209ENST00000530620 RALGAPBQ86X10 1494 aa15.73■□□□□ 0.11
C11orf54-209ENST00000530620 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
C11orf54-209ENST00000530620 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
C11orf54-209ENST00000530620 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
C11orf54-209ENST00000530620 ITSN1Q15811 1721 aa15.73■□□□□ 0.11
C11orf54-209ENST00000530620 GJD4Q96KN9 370 aaPredicted RBP15.71■□□□□ 0.11
C11orf54-209ENST00000530620 TULP4Q9NRJ4 1543 aa15.71■□□□□ 0.11
C11orf54-209ENST00000530620 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
C11orf54-209ENST00000530620 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
C11orf54-209ENST00000530620 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
C11orf54-209ENST00000530620 UNC5CLQ8IV45 518 aa15.69■□□□□ 0.1
C11orf54-209ENST00000530620 CABLES1Q8TDN4 633 aa15.69■□□□□ 0.1
C11orf54-209ENST00000530620 POGKQ9P215 609 aa15.69■□□□□ 0.1
C11orf54-209ENST00000530620 ARHGEF10O15013 1369 aa15.68■□□□□ 0.1
C11orf54-209ENST00000530620 POTEHQ6S545 545 aa15.68■□□□□ 0.1
C11orf54-209ENST00000530620 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
C11orf54-209ENST00000530620 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
C11orf54-209ENST00000530620 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
C11orf54-209ENST00000530620 PSME1Q06323 249 aa15.67■□□□□ 0.1
C11orf54-209ENST00000530620 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
C11orf54-209ENST00000530620 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
C11orf54-209ENST00000530620 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
C11orf54-209ENST00000530620 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
C11orf54-209ENST00000530620 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
C11orf54-209ENST00000530620 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
C11orf54-209ENST00000530620 PRR36Q9H6K5 1346 aa15.66■□□□□ 0.1
C11orf54-209ENST00000530620 KIAA1210Q9ULL0 1709 aa15.65■□□□□ 0.1
C11orf54-209ENST00000530620 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
C11orf54-209ENST00000530620 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
C11orf54-209ENST00000530620 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
C11orf54-209ENST00000530620 EIF3AQ14152 1382 aaKnown RBP15.64■□□□□ 0.09
C11orf54-209ENST00000530620 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
C11orf54-209ENST00000530620 MIER1Q8N108 512 aa15.64■□□□□ 0.09
C11orf54-209ENST00000530620 ATP7BP35670 1465 aa15.64■□□□□ 0.09
C11orf54-209ENST00000530620 VPS72Q15906 364 aa15.62■□□□□ 0.09
C11orf54-209ENST00000530620 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
C11orf54-209ENST00000530620 BLMP54132 1417 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-209ENST00000530620 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
C11orf54-209ENST00000530620 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
C11orf54-209ENST00000530620 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
C11orf54-209ENST00000530620 FAM83GA6ND36 823 aa15.59■□□□□ 0.09
C11orf54-209ENST00000530620 SEPT12Q8IYM1 358 aa15.59■□□□□ 0.09
C11orf54-209ENST00000530620 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
C11orf54-209ENST00000530620 THSD7AQ9UPZ6 1657 aa15.59■□□□□ 0.09
C11orf54-209ENST00000530620 RGPD1P0DJD0 1748 aa15.58■□□□□ 0.08
C11orf54-209ENST00000530620 HRCP23327 699 aa15.58■□□□□ 0.08
C11orf54-209ENST00000530620 STAC3Q96MF2 364 aa15.58■□□□□ 0.08
C11orf54-209ENST00000530620 QRICH2Q9H0J4 1663 aa15.57■□□□□ 0.08
C11orf54-209ENST00000530620 TNS1Q9HBL0 1735 aaKnown RBP15.57■□□□□ 0.08
C11orf54-209ENST00000530620 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
C11orf54-209ENST00000530620 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
C11orf54-209ENST00000530620 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
C11orf54-209ENST00000530620 ONECUT3O60422 494 aaPredicted RBP15.55■□□□□ 0.08
C11orf54-209ENST00000530620 NGDNQ8NEJ9 315 aaKnown RBP15.55■□□□□ 0.08
C11orf54-209ENST00000530620 BTG4Q9NY30 223 aa15.55■□□□□ 0.08
C11orf54-209ENST00000530620 DEFB132Q7Z7B7 95 aa15.54■□□□□ 0.08
C11orf54-209ENST00000530620 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
C11orf54-209ENST00000530620 A0A0G2JS52 829 aa15.53■□□□□ 0.08
C11orf54-209ENST00000530620 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
C11orf54-209ENST00000530620 MYT1Q01538 1121 aa15.53■□□□□ 0.08
C11orf54-209ENST00000530620 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
C11orf54-209ENST00000530620 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
C11orf54-209ENST00000530620 NUDT16Q96DE0 195 aaKnown RBP15.52■□□□□ 0.08
C11orf54-209ENST00000530620 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
C11orf54-209ENST00000530620 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
C11orf54-209ENST00000530620 LRP5O75197 1615 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 SPATA31A5Q5VU36 1347 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 SPATA31A7Q8IWB4 1347 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
C11orf54-209ENST00000530620 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
C11orf54-209ENST00000530620 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
C11orf54-209ENST00000530620 TRPM1Q7Z4N2 1603 aa15.49■□□□□ 0.07
C11orf54-209ENST00000530620 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
C11orf54-209ENST00000530620 ACEP12821 1306 aa15.47■□□□□ 0.07
C11orf54-209ENST00000530620 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
C11orf54-209ENST00000530620 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
C11orf54-209ENST00000530620 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
C11orf54-209ENST00000530620 FAM182BQ5T319 152 aa15.46■□□□□ 0.07
C11orf54-209ENST00000530620 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
C11orf54-209ENST00000530620 PPIP5K1Q6PFW1 1433 aa15.45■□□□□ 0.06
C11orf54-209ENST00000530620 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
C11orf54-209ENST00000530620 WNK3Q9BYP7 1800 aa15.45■□□□□ 0.06
C11orf54-209ENST00000530620 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
C11orf54-209ENST00000530620 SPATA31A1Q5TZJ5 1347 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms