RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
USP35-207ENST00000530546 LAS1LQ9Y4W2 734 aaKnown RBP14.92□□□□□ -0.02
USP35-207ENST00000530546 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
USP35-207ENST00000530546 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
USP35-207ENST00000530546 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
USP35-207ENST00000530546 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
USP35-207ENST00000530546 MS4A1P11836 297 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 NUDT16Q96DE0 195 aaKnown RBP14.9□□□□□ -0.02
USP35-207ENST00000530546 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 BCL2L13Q9BXK5 485 aa14.9□□□□□ -0.02
USP35-207ENST00000530546 DIAPH1O60610 1272 aaKnown RBP14.89□□□□□ -0.03
USP35-207ENST00000530546 LTKP29376 864 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 NME9Q86XW9 330 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
USP35-207ENST00000530546 WDR63Q8IWG1 891 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
USP35-207ENST00000530546 SETD1AO15047 1707 aaKnown RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 NPM2Q86SE8 214 aaKnown RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
USP35-207ENST00000530546 PDE4AP27815 886 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
USP35-207ENST00000530546 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 TSR2Q969E8 191 aaKnown RBP14.86□□□□□ -0.03
USP35-207ENST00000530546 TMPOP42166 694 aaKnown RBP14.86□□□□□ -0.03
USP35-207ENST00000530546 POLKQ9UBT6 870 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
USP35-207ENST00000530546 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
USP35-207ENST00000530546 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 MYH16Q9H6N6 1097 aa14.85□□□□□ -0.03
USP35-207ENST00000530546 HMOX1P09601 288 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 RIPK4P57078 832 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 TNNQ9UQP3 1299 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 EID1Q9Y6B2 187 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 MED14O60244 1454 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
USP35-207ENST00000530546 ATP7BP35670 1465 aa14.84□□□□□ -0.03
USP35-207ENST00000530546 PRR36Q9H6K5 1346 aa14.83□□□□□ -0.03
USP35-207ENST00000530546 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
USP35-207ENST00000530546 TRIM35Q9UPQ4 493 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 RRS1Q15050 365 aaKnown RBP14.82□□□□□ -0.04
USP35-207ENST00000530546 CLUAP1Q96AJ1 413 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 PRKAR2BP31323 418 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 COG3Q96JB2 828 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 UBR1Q8IWV7 1749 aa14.82□□□□□ -0.04
USP35-207ENST00000530546 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 GLIPR1L2Q4G1C9 344 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 SIRT1Q96EB6 747 aa14.81□□□□□ -0.04
USP35-207ENST00000530546 CPSF1Q10570 1443 aaKnown RBP14.81□□□□□ -0.04
USP35-207ENST00000530546 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
USP35-207ENST00000530546 EXOSC9Q06265 439 aaKnown RBP14.8□□□□□ -0.04
USP35-207ENST00000530546 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 PNPLA6Q8IY17 1366 aa14.8□□□□□ -0.04
USP35-207ENST00000530546 RGS3P49796 1198 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 TECPR2O15040 1411 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 SOX12O15370 315 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
USP35-207ENST00000530546 RLBP1P12271 317 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
USP35-207ENST00000530546 FCHSD2O94868 740 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 CPS1P31327 1500 aa14.78□□□□□ -0.04
USP35-207ENST00000530546 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.04
USP35-207ENST00000530546 ADGRB2O60241 1585 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 IGHDP01880 384 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 ACEP12821 1306 aa14.77□□□□□ -0.05
USP35-207ENST00000530546 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 THUMPD2Q9BTF0 503 aaKnown RBP14.76□□□□□ -0.05
USP35-207ENST00000530546 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
USP35-207ENST00000530546 SMC4Q9NTJ3 1288 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 PTPRUQ92729 1446 aa14.76□□□□□ -0.05
USP35-207ENST00000530546 IL13P35225 146 aa14.75□□□□□ -0.05
USP35-207ENST00000530546 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
USP35-207ENST00000530546 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
USP35-207ENST00000530546 CDC42BPGQ6DT37 1551 aa14.74□□□□□ -0.05
USP35-207ENST00000530546 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
USP35-207ENST00000530546 LRRC7Q96NW7 1537 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 KNDC1Q76NI1 1749 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
USP35-207ENST00000530546 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 C3P01024 1663 aa14.73□□□□□ -0.05
USP35-207ENST00000530546 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms