RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 WASHC2AQ641Q2 1341 aa7.31□□□□□ -1.24
PUM1-220ENST00000529846 AHDC1Q5TGY3 1603 aaPredicted RBP7.31□□□□□ -1.24
PUM1-220ENST00000529846 NLRP13Q86W25 1043 aa7.31□□□□□ -1.24
PUM1-220ENST00000529846 TMC1Q8TDI8 760 aa7.31□□□□□ -1.24
PUM1-220ENST00000529846 SPATA31A3Q5VYP0 1347 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 PRR36Q9H6K5 1346 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 HSPA1LP34931 641 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 MKRN4PQ13434 485 aaPredicted RBP7.3□□□□□ -1.24
PUM1-220ENST00000529846 KCNH5Q8NCM2 988 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 MYOM1P52179 1685 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 ANKRD36BQ8N2N9 1353 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 ITSN1Q15811 1721 aa7.3□□□□□ -1.24
PUM1-220ENST00000529846 ROBO1Q9Y6N7 1651 aa7.29□□□□□ -1.24
PUM1-220ENST00000529846 CPSF1Q10570 1443 aaKnown RBP7.29□□□□□ -1.24
PUM1-220ENST00000529846 NUTM2FA1L443 756 aa7.29□□□□□ -1.24
PUM1-220ENST00000529846 PMFBP1Q8TBY8 1022 aa7.29□□□□□ -1.24
PUM1-220ENST00000529846 KTN1Q86UP2 1357 aaKnown RBP7.29□□□□□ -1.24
PUM1-220ENST00000529846 CGNL1Q0VF96 1302 aa7.28□□□□□ -1.24
PUM1-220ENST00000529846 EDC4Q6P2E9 1401 aaKnown RBP7.28□□□□□ -1.24
PUM1-220ENST00000529846 PAK3O75914 559 aaPredicted RBP7.28□□□□□ -1.24
PUM1-220ENST00000529846 POLA2Q14181 598 aa7.28□□□□□ -1.24
PUM1-220ENST00000529846 ABTB2Q8N961 1025 aa7.28□□□□□ -1.24
PUM1-220ENST00000529846 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
PUM1-220ENST00000529846 DISP3Q9P2K9 1392 aa7.28□□□□□ -1.24
PUM1-220ENST00000529846 KIF7Q2M1P5 1343 aa7.27□□□□□ -1.24
PUM1-220ENST00000529846 USP6P35125 1406 aa7.27□□□□□ -1.24
PUM1-220ENST00000529846 TNS3Q68CZ2 1445 aa7.27□□□□□ -1.24
PUM1-220ENST00000529846 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
PUM1-220ENST00000529846 ILDR1Q86SU0 546 aaPredicted RBP7.27□□□□□ -1.25
PUM1-220ENST00000529846 KNSTRNQ9Y448 316 aa7.27□□□□□ -1.25
PUM1-220ENST00000529846 NSD2O96028 1365 aa7.27□□□□□ -1.25
PUM1-220ENST00000529846 PXDNQ92626 1479 aa7.27□□□□□ -1.25
PUM1-220ENST00000529846 SSH2Q76I76 1423 aa7.27□□□□□ -1.25
PUM1-220ENST00000529846 TTC21BQ7Z4L5 1316 aa7.27□□□□□ -1.25
PUM1-220ENST00000529846 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
PUM1-220ENST00000529846 NPC1L1Q9UHC9 1359 aa7.26□□□□□ -1.25
PUM1-220ENST00000529846 ABCB7O75027 752 aa7.26□□□□□ -1.25
PUM1-220ENST00000529846 NHSL1Q5SYE7 1610 aa7.26□□□□□ -1.25
PUM1-220ENST00000529846 PHLPP1O60346 1717 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 NLRP6P59044 892 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 DDX10Q13206 875 aaKnown RBP7.25□□□□□ -1.25
PUM1-220ENST00000529846 LMOD2Q6P5Q4 547 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 COG3Q96JB2 828 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 PANK3Q9H999 370 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 USP32Q8NFA0 1604 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 TOPAZ1Q8N9V7 1692 aa7.25□□□□□ -1.25
PUM1-220ENST00000529846 A0A1W2PP64 1363 aa7.24□□□□□ -1.25
PUM1-220ENST00000529846 KIF24Q5T7B8 1368 aa7.24□□□□□ -1.25
PUM1-220ENST00000529846 PNPLA6Q8IY17 1366 aa7.24□□□□□ -1.25
PUM1-220ENST00000529846 ANP32CO43423 234 aa7.24□□□□□ -1.25
PUM1-220ENST00000529846 ZNF772Q68DY9 489 aaPredicted RBP7.24□□□□□ -1.25
PUM1-220ENST00000529846 USP19O94966 1318 aa7.24□□□□□ -1.25
PUM1-220ENST00000529846 COL16A1Q07092 1604 aaPredicted RBP7.23□□□□□ -1.25
PUM1-220ENST00000529846 CPDO75976 1380 aa7.23□□□□□ -1.25
PUM1-220ENST00000529846 FYB1O15117 783 aa7.23□□□□□ -1.25
PUM1-220ENST00000529846 GCP02774 474 aa7.23□□□□□ -1.25
PUM1-220ENST00000529846 MEX3CQ5U5Q3 659 aaKnown RBP7.23□□□□□ -1.25
PUM1-220ENST00000529846 POLR3GLQ9BT43 218 aa7.23□□□□□ -1.25
PUM1-220ENST00000529846 CD163L1Q9NR16 1453 aa7.23□□□□□ -1.25
PUM1-220ENST00000529846 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
PUM1-220ENST00000529846 SHPRHQ149N8 1683 aa7.22□□□□□ -1.25
PUM1-220ENST00000529846 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
PUM1-220ENST00000529846 CCER2I3L3R5 266 aa7.22□□□□□ -1.25
PUM1-220ENST00000529846 XPCQ01831 940 aaPredicted RBP7.22□□□□□ -1.25
PUM1-220ENST00000529846 MIER1Q8N108 512 aa7.22□□□□□ -1.25
PUM1-220ENST00000529846 FNBP4Q8N3X1 1017 aaPredicted RBP7.22□□□□□ -1.25
PUM1-220ENST00000529846 PER1O15534 1290 aaPredicted RBP7.21□□□□□ -1.26
PUM1-220ENST00000529846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.21□□□□□ -1.26
PUM1-220ENST00000529846 DDX17Q92841 729 aaKnown RBP7.21□□□□□ -1.26
PUM1-220ENST00000529846 NGLY1Q96IV0 654 aa7.21□□□□□ -1.26
PUM1-220ENST00000529846 CARD14Q9BXL6 1004 aa7.21□□□□□ -1.26
PUM1-220ENST00000529846 ANKRD26Q9UPS8 1709 aa7.21□□□□□ -1.26
PUM1-220ENST00000529846 AATKQ6ZMQ8 1374 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
PUM1-220ENST00000529846 NSD3Q9BZ95 1437 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 SPDYE4A6NLX3 237 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 RALBP1Q15311 655 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 MORC1Q86VD1 984 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 PRDM11Q9NQV5 511 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 ABCC6O95255 1503 aa7.2□□□□□ -1.26
PUM1-220ENST00000529846 RGPD8O14715 1765 aaPredicted RBP7.2□□□□□ -1.26
PUM1-220ENST00000529846 TRPM3Q9HCF6 1732 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 AKAP12Q02952 1782 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 EVA1CP58658 441 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 ARHGEF25Q86VW2 580 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 NME9Q86XW9 330 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 NUTM2AQ8IVF1 878 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 CDCA7Q9BWT1 371 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 TRPC5Q9UL62 973 aaPredicted RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
PUM1-220ENST00000529846 RTL1A6NKG5 1358 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 ALS2Q96Q42 1657 aa7.19□□□□□ -1.26
PUM1-220ENST00000529846 MON2Q7Z3U7 1717 aa7.18□□□□□ -1.26
PUM1-220ENST00000529846 KIF20BQ96Q89 1820 aa7.18□□□□□ -1.26
PUM1-220ENST00000529846 FAM83GA6ND36 823 aa7.18□□□□□ -1.26
PUM1-220ENST00000529846 DSG3P32926 999 aa7.18□□□□□ -1.26
PUM1-220ENST00000529846 UNC5CLQ8IV45 518 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms