RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
RPS3-210ENST00000528439 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
RPS3-210ENST00000528439 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
RPS3-210ENST00000528439 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
RPS3-210ENST00000528439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPS3-210ENST00000528439 C19orf44Q9H6X5 657 aa13.62□□□□□ -0.23
RPS3-210ENST00000528439 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
RPS3-210ENST00000528439 NME9Q86XW9 330 aa13.61□□□□□ -0.23
RPS3-210ENST00000528439 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
RPS3-210ENST00000528439 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
RPS3-210ENST00000528439 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
RPS3-210ENST00000528439 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
RPS3-210ENST00000528439 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
RPS3-210ENST00000528439 TTC21BQ7Z4L5 1316 aa13.6□□□□□ -0.23
RPS3-210ENST00000528439 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 MSH6P52701 1360 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
RPS3-210ENST00000528439 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
RPS3-210ENST00000528439 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
RPS3-210ENST00000528439 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
RPS3-210ENST00000528439 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
RPS3-210ENST00000528439 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
RPS3-210ENST00000528439 ESCO1Q5FWF5 840 aa13.57□□□□□ -0.24
RPS3-210ENST00000528439 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
RPS3-210ENST00000528439 ATF3P18847 181 aa13.56□□□□□ -0.24
RPS3-210ENST00000528439 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
RPS3-210ENST00000528439 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
RPS3-210ENST00000528439 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
RPS3-210ENST00000528439 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
RPS3-210ENST00000528439 USP31Q70CQ4 1352 aa13.54□□□□□ -0.24
RPS3-210ENST00000528439 FBLN1P23142 703 aa13.53□□□□□ -0.24
RPS3-210ENST00000528439 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
RPS3-210ENST00000528439 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
RPS3-210ENST00000528439 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
RPS3-210ENST00000528439 FOXO3O43524 673 aa13.52□□□□□ -0.25
RPS3-210ENST00000528439 MTHFSP49914 203 aa13.52□□□□□ -0.25
RPS3-210ENST00000528439 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
RPS3-210ENST00000528439 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
RPS3-210ENST00000528439 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
RPS3-210ENST00000528439 PXDNQ92626 1479 aa13.52□□□□□ -0.25
RPS3-210ENST00000528439 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
RPS3-210ENST00000528439 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
RPS3-210ENST00000528439 COG3Q96JB2 828 aa13.51□□□□□ -0.25
RPS3-210ENST00000528439 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
RPS3-210ENST00000528439 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
RPS3-210ENST00000528439 NFAT5O94916 1531 aa13.49□□□□□ -0.25
RPS3-210ENST00000528439 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
RPS3-210ENST00000528439 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
RPS3-210ENST00000528439 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
RPS3-210ENST00000528439 SLIT3O75094 1523 aa13.49□□□□□ -0.25
RPS3-210ENST00000528439 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
RPS3-210ENST00000528439 TOM1O60784 492 aa13.48□□□□□ -0.25
RPS3-210ENST00000528439 PSME1Q06323 249 aa13.48□□□□□ -0.25
RPS3-210ENST00000528439 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
RPS3-210ENST00000528439 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
RPS3-210ENST00000528439 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
RPS3-210ENST00000528439 INSRP06213 1382 aa13.47□□□□□ -0.25
RPS3-210ENST00000528439 MED1Q15648 1581 aaPredicted RBP13.47□□□□□ -0.25
RPS3-210ENST00000528439 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
RPS3-210ENST00000528439 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPS3-210ENST00000528439 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
RPS3-210ENST00000528439 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
RPS3-210ENST00000528439 SLAIN2Q9P270 581 aa13.46□□□□□ -0.25
RPS3-210ENST00000528439 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
RPS3-210ENST00000528439 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
RPS3-210ENST00000528439 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
RPS3-210ENST00000528439 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 SOX12O15370 315 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 NLRP6P59044 892 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
RPS3-210ENST00000528439 USP19O94966 1318 aa13.44□□□□□ -0.26
RPS3-210ENST00000528439 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPS3-210ENST00000528439 LTN1O94822 1766 aa13.44□□□□□ -0.26
RPS3-210ENST00000528439 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
RPS3-210ENST00000528439 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
RPS3-210ENST00000528439 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
RPS3-210ENST00000528439 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
RPS3-210ENST00000528439 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
RPS3-210ENST00000528439 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
RPS3-210ENST00000528439 SOS2Q07890 1332 aaPredicted RBP13.41□□□□□ -0.26
RPS3-210ENST00000528439 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
RPS3-210ENST00000528439 PIP4K2BP78356 416 aa13.41□□□□□ -0.26
RPS3-210ENST00000528439 SPATA31A3Q5VYP0 1347 aa13.4□□□□□ -0.26
RPS3-210ENST00000528439 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
RPS3-210ENST00000528439 FBXO41Q8TF61 875 aa13.4□□□□□ -0.26
RPS3-210ENST00000528439 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
RPS3-210ENST00000528439 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
RPS3-210ENST00000528439 IL13P35225 146 aa13.39□□□□□ -0.27
RPS3-210ENST00000528439 FLT4P35916 1363 aa13.39□□□□□ -0.27
RPS3-210ENST00000528439 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
RPS3-210ENST00000528439 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
RPS3-210ENST00000528439 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
RPS3-210ENST00000528439 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
RPS3-210ENST00000528439 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms