RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 RALGAPBQ86X10 1494 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 NUCB2P80303 420 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 FAM184AQ8NB25 1140 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 RAPGEF4Q8WZA2 1011 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 C11orf95C9JLR9 678 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-218ENST00000528232 GNAI3P08754 354 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-218ENST00000528232 RNF20Q5VTR2 975 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 BCAR3O75815 825 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 NOB1Q9ULX3 412 aaKnown RBP8.73□□□□□ -1.01
CTNND1-218ENST00000528232 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 POGZQ7Z3K3 1410 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 PBRM1Q86U86 1689 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 RAPGEF3O95398 923 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 FANCAO15360 1455 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 ATF3P18847 181 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 SLFN5Q08AF3 891 aa8.73□□□□□ -1.01
CTNND1-218ENST00000528232 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
CTNND1-218ENST00000528232 THEMISQ8N1K5 641 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-218ENST00000528232 RDXP35241 583 aaKnown RBP8.72□□□□□ -1.01
CTNND1-218ENST00000528232 MVPQ14764 893 aaKnown RBP8.71□□□□□ -1.01
CTNND1-218ENST00000528232 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.01
CTNND1-218ENST00000528232 TSR2Q969E8 191 aaKnown RBP8.71□□□□□ -1.01
CTNND1-218ENST00000528232 PDCL3Q9H2J4 239 aa8.71□□□□□ -1.01
CTNND1-218ENST00000528232 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.01
CTNND1-218ENST00000528232 PDCL2Q8N4E4 241 aa8.71□□□□□ -1.01
CTNND1-218ENST00000528232 ABTB2Q8N961 1025 aa8.71□□□□□ -1.01
CTNND1-218ENST00000528232 FCHSD2O94868 740 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 PLEKHO1Q53GL0 409 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-218ENST00000528232 ZNF428Q96B54 188 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 DNAJC5BQ9UF47 199 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 NUP160Q12769 1436 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-218ENST00000528232 ATP10BO94823 1461 aa8.71□□□□□ -1.02
CTNND1-218ENST00000528232 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 NUTM2GQ5VZR2 741 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 ATF7IPQ6VMQ6 1270 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 NSD2O96028 1365 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
CTNND1-218ENST00000528232 NFKBIBQ15653 356 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 WWC1Q8IX03 1113 aa8.7□□□□□ -1.02
CTNND1-218ENST00000528232 DNMT1P26358 1616 aaKnown RBP8.7□□□□□ -1.02
CTNND1-218ENST00000528232 FRAT2O75474 233 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-218ENST00000528232 CCT4P50991 539 aaKnown RBP8.69□□□□□ -1.02
CTNND1-218ENST00000528232 CNTROBQ8N137 903 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 DHX29Q7Z478 1369 aaKnown RBP8.69□□□□□ -1.02
CTNND1-218ENST00000528232 SYCP2Q9BX26 1530 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 ABCC11Q96J66 1382 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 PLCH2O75038 1416 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 GNAI2P04899 355 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 SULT6B1Q6IMI4 303 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 CCDC70Q6NSX1 233 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 KDM5BQ9UGL1 1544 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 CAVIN1Q6NZI2 390 aaKnown RBP8.69□□□□□ -1.02
CTNND1-218ENST00000528232 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
CTNND1-218ENST00000528232 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
CTNND1-218ENST00000528232 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-218ENST00000528232 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 SMC3Q9UQE7 1217 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 NFE2L2Q16236 605 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 NOS1P29475 1434 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
CTNND1-218ENST00000528232 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
CTNND1-218ENST00000528232 TMPOP42166 694 aaKnown RBP8.67□□□□□ -1.02
CTNND1-218ENST00000528232 RABEP1Q15276 862 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 AKAP17AQ02040 695 aaKnown RBP8.67□□□□□ -1.02
CTNND1-218ENST00000528232 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 RASSF8Q8NHQ8 419 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 ADGRF5Q8IZF2 1346 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 ABCA5Q8WWZ7 1642 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 GOLGA6L19H0YKK7 550 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 CEP89Q96ST8 783 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 G3V3G9 751 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 HIP1O00291 1037 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 MCM2P49736 904 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 ARHGEF12Q9NZN5 1544 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 SLC4A2P04920 1241 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 PSMA5P28066 241 aa8.67□□□□□ -1.02
CTNND1-218ENST00000528232 TRIM29Q14134 588 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 CDR1P51861 262 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 AIMP1Q12904 312 aaKnown RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 CLASRPQ8N2M8 674 aaKnown RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 ZMYND15Q9H091 742 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 STK11IPQ8N1F8 1099 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms