RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 TERF2IPQ9NYB0 399 aa21.15■□□□□ 0.98
LTBP3-209ENST00000527792 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
LTBP3-209ENST00000527792 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
LTBP3-209ENST00000527792 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
LTBP3-209ENST00000527792 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
LTBP3-209ENST00000527792 ACEP12821 1306 aa21.11■□□□□ 0.97
LTBP3-209ENST00000527792 ANKRD36BQ8N2N9 1353 aa21.1■□□□□ 0.97
LTBP3-209ENST00000527792 NHSL1Q5SYE7 1610 aa21.1■□□□□ 0.97
LTBP3-209ENST00000527792 SOS2Q07890 1332 aaPredicted RBP21.09■□□□□ 0.97
LTBP3-209ENST00000527792 ZNF692Q9BU19 519 aaPredicted RBP21.08■□□□□ 0.97
LTBP3-209ENST00000527792 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
LTBP3-209ENST00000527792 KTN1Q86UP2 1357 aaKnown RBP21.08■□□□□ 0.96
LTBP3-209ENST00000527792 RGS12O14924 1447 aa21.07■□□□□ 0.96
LTBP3-209ENST00000527792 FOXO3O43524 673 aa21.07■□□□□ 0.96
LTBP3-209ENST00000527792 PSME1Q06323 249 aa21.07■□□□□ 0.96
LTBP3-209ENST00000527792 USP21Q9UK80 565 aa21.07■□□□□ 0.96
LTBP3-209ENST00000527792 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
LTBP3-209ENST00000527792 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
LTBP3-209ENST00000527792 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
LTBP3-209ENST00000527792 CD163L1Q9NR16 1453 aa21.06■□□□□ 0.96
LTBP3-209ENST00000527792 CARD14Q9BXL6 1004 aa21.05■□□□□ 0.96
LTBP3-209ENST00000527792 POLR3AO14802 1390 aaPredicted RBP21.05■□□□□ 0.96
LTBP3-209ENST00000527792 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
LTBP3-209ENST00000527792 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
LTBP3-209ENST00000527792 TRPC5Q9UL62 973 aaPredicted RBP21.04■□□□□ 0.96
LTBP3-209ENST00000527792 AKAP12Q02952 1782 aa21.04■□□□□ 0.96
LTBP3-209ENST00000527792 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
LTBP3-209ENST00000527792 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
LTBP3-209ENST00000527792 FNBP4Q8N3X1 1017 aaPredicted RBP21.03■□□□□ 0.96
LTBP3-209ENST00000527792 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
LTBP3-209ENST00000527792 KRT28Q7Z3Y7 464 aa21.02■□□□□ 0.96
LTBP3-209ENST00000527792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
LTBP3-209ENST00000527792 USP6P35125 1406 aa21.01■□□□□ 0.95
LTBP3-209ENST00000527792 NPHP3Q7Z494 1330 aa21.01■□□□□ 0.95
LTBP3-209ENST00000527792 MON2Q7Z3U7 1717 aa21.01■□□□□ 0.95
LTBP3-209ENST00000527792 EDC4Q6P2E9 1401 aaKnown RBP20.99■□□□□ 0.95
LTBP3-209ENST00000527792 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
LTBP3-209ENST00000527792 CGNL1Q0VF96 1302 aa20.98■□□□□ 0.95
LTBP3-209ENST00000527792 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
LTBP3-209ENST00000527792 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
LTBP3-209ENST00000527792 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
LTBP3-209ENST00000527792 TTC21AQ8NDW8 1320 aa20.95■□□□□ 0.94
LTBP3-209ENST00000527792 NME9Q86XW9 330 aa20.94■□□□□ 0.94
LTBP3-209ENST00000527792 BRD4O60885 1362 aaPredicted RBP20.94■□□□□ 0.94
LTBP3-209ENST00000527792 NRKQ7Z2Y5 1582 aa20.93■□□□□ 0.94
LTBP3-209ENST00000527792 ANP32CO43423 234 aa20.93■□□□□ 0.94
LTBP3-209ENST00000527792 ABTB2Q8N961 1025 aa20.93■□□□□ 0.94
LTBP3-209ENST00000527792 GGNBP2Q9H3C7 697 aa20.93■□□□□ 0.94
LTBP3-209ENST00000527792 ATRNO75882 1429 aa20.93■□□□□ 0.94
LTBP3-209ENST00000527792 FYB1O15117 783 aa20.92■□□□□ 0.94
LTBP3-209ENST00000527792 AMER1Q5JTC6 1135 aaPredicted RBP20.92■□□□□ 0.94
LTBP3-209ENST00000527792 SSH2Q76I76 1423 aa20.92■□□□□ 0.94
LTBP3-209ENST00000527792 PLEKHG5O94827 1062 aa20.91■□□□□ 0.94
LTBP3-209ENST00000527792 NUTM2GQ5VZR2 741 aa20.91■□□□□ 0.94
LTBP3-209ENST00000527792 PXDNQ92626 1479 aa20.91■□□□□ 0.94
LTBP3-209ENST00000527792 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
LTBP3-209ENST00000527792 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
LTBP3-209ENST00000527792 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
LTBP3-209ENST00000527792 ZRANB1Q9UGI0 708 aa20.9■□□□□ 0.94
LTBP3-209ENST00000527792 BCL9LQ86UU0 1499 aa20.89■□□□□ 0.94
LTBP3-209ENST00000527792 NLRP6P59044 892 aa20.89■□□□□ 0.93
LTBP3-209ENST00000527792 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
LTBP3-209ENST00000527792 COG3Q96JB2 828 aa20.89■□□□□ 0.93
LTBP3-209ENST00000527792 TRPM3Q9HCF6 1732 aaPredicted RBP20.89■□□□□ 0.93
LTBP3-209ENST00000527792 NSD2O96028 1365 aa20.88■□□□□ 0.93
LTBP3-209ENST00000527792 CCDC125Q86Z20 511 aa20.88■□□□□ 0.93
LTBP3-209ENST00000527792 NPC1L1Q9UHC9 1359 aa20.87■□□□□ 0.93
LTBP3-209ENST00000527792 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
LTBP3-209ENST00000527792 SPATA31A3Q5VYP0 1347 aa20.86■□□□□ 0.93
LTBP3-209ENST00000527792 TNNT2P45379 298 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-209ENST00000527792 NLRP13Q86W25 1043 aa20.86■□□□□ 0.93
LTBP3-209ENST00000527792 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
LTBP3-209ENST00000527792 RALBP1Q15311 655 aa20.84■□□□□ 0.93
LTBP3-209ENST00000527792 UNC5CLQ8IV45 518 aa20.84■□□□□ 0.93
LTBP3-209ENST00000527792 COL22A1Q8NFW1 1626 aaPredicted RBP20.84■□□□□ 0.93
LTBP3-209ENST00000527792 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
LTBP3-209ENST00000527792 SOX12O15370 315 aa20.83■□□□□ 0.93
LTBP3-209ENST00000527792 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
LTBP3-209ENST00000527792 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.92
LTBP3-209ENST00000527792 USP31Q70CQ4 1352 aa20.83■□□□□ 0.92
LTBP3-209ENST00000527792 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
LTBP3-209ENST00000527792 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
LTBP3-209ENST00000527792 OVOS2A0A0J9YW53 1432 aa20.8■□□□□ 0.92
LTBP3-209ENST00000527792 OVOS2Q6IE36 1432 aa20.8■□□□□ 0.92
LTBP3-209ENST00000527792 PARD3Q8TEW0 1356 aa20.8■□□□□ 0.92
LTBP3-209ENST00000527792 HAP1P54257 671 aaPredicted RBP20.79■□□□□ 0.92
LTBP3-209ENST00000527792 MIER1Q8N108 512 aa20.78■□□□□ 0.92
LTBP3-209ENST00000527792 CABLES1Q8TDN4 633 aa20.77■□□□□ 0.92
LTBP3-209ENST00000527792 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
LTBP3-209ENST00000527792 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
LTBP3-209ENST00000527792 FBLN1P23142 703 aa20.76■□□□□ 0.91
LTBP3-209ENST00000527792 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
LTBP3-209ENST00000527792 SLIT2O94813 1529 aa20.75■□□□□ 0.91
LTBP3-209ENST00000527792 USP54Q70EL1 1684 aa20.75■□□□□ 0.91
LTBP3-209ENST00000527792 PPP2R1AP30153 589 aa20.75■□□□□ 0.91
LTBP3-209ENST00000527792 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
LTBP3-209ENST00000527792 GCP02774 474 aa20.74■□□□□ 0.91
LTBP3-209ENST00000527792 SEPT12Q8IYM1 358 aa20.74■□□□□ 0.91
LTBP3-209ENST00000527792 USP19O94966 1318 aa20.74■□□□□ 0.91
LTBP3-209ENST00000527792 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms