RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
CDC27-204ENST00000527547 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
CDC27-204ENST00000527547 NRKQ7Z2Y5 1582 aa12.37□□□□□ -0.43
CDC27-204ENST00000527547 ATF3P18847 181 aa12.37□□□□□ -0.43
CDC27-204ENST00000527547 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDC27-204ENST00000527547 MTHFSP49914 203 aa12.36□□□□□ -0.43
CDC27-204ENST00000527547 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
CDC27-204ENST00000527547 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
CDC27-204ENST00000527547 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
CDC27-204ENST00000527547 FOXO3O43524 673 aa12.35□□□□□ -0.43
CDC27-204ENST00000527547 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
CDC27-204ENST00000527547 C1orf167Q5SNV9 1468 aa12.35□□□□□ -0.43
CDC27-204ENST00000527547 SSH2Q76I76 1423 aa12.35□□□□□ -0.43
CDC27-204ENST00000527547 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
CDC27-204ENST00000527547 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
CDC27-204ENST00000527547 MST1RQ04912 1400 aa12.34□□□□□ -0.43
CDC27-204ENST00000527547 MSH6P52701 1360 aa12.34□□□□□ -0.43
CDC27-204ENST00000527547 SOX12O15370 315 aa12.34□□□□□ -0.43
CDC27-204ENST00000527547 COG3Q96JB2 828 aa12.34□□□□□ -0.43
CDC27-204ENST00000527547 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
CDC27-204ENST00000527547 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
CDC27-204ENST00000527547 PSME1Q06323 249 aa12.33□□□□□ -0.44
CDC27-204ENST00000527547 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
CDC27-204ENST00000527547 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
CDC27-204ENST00000527547 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
CDC27-204ENST00000527547 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
CDC27-204ENST00000527547 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
CDC27-204ENST00000527547 EMILIN1Q9Y6C2 1016 aa12.31□□□□□ -0.44
CDC27-204ENST00000527547 DCCP43146 1447 aa12.31□□□□□ -0.44
CDC27-204ENST00000527547 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
CDC27-204ENST00000527547 PIK3C2AO00443 1686 aa12.31□□□□□ -0.44
CDC27-204ENST00000527547 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDC27-204ENST00000527547 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
CDC27-204ENST00000527547 OVOS2A0A0J9YW53 1432 aa12.3□□□□□ -0.44
CDC27-204ENST00000527547 OVOS2Q6IE36 1432 aa12.3□□□□□ -0.44
CDC27-204ENST00000527547 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
CDC27-204ENST00000527547 NLRP6P59044 892 aa12.3□□□□□ -0.44
CDC27-204ENST00000527547 SALL2Q9Y467 1007 aaPredicted RBP12.29□□□□□ -0.44
CDC27-204ENST00000527547 AEBP2Q6ZN18 517 aaPredicted RBP12.29□□□□□ -0.44
CDC27-204ENST00000527547 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
CDC27-204ENST00000527547 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
CDC27-204ENST00000527547 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
CDC27-204ENST00000527547 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
CDC27-204ENST00000527547 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
CDC27-204ENST00000527547 CFAP53Q96M91 514 aa12.27□□□□□ -0.44
CDC27-204ENST00000527547 SLAIN2Q9P270 581 aa12.27□□□□□ -0.44
CDC27-204ENST00000527547 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
CDC27-204ENST00000527547 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
CDC27-204ENST00000527547 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
CDC27-204ENST00000527547 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
CDC27-204ENST00000527547 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
CDC27-204ENST00000527547 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
CDC27-204ENST00000527547 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
CDC27-204ENST00000527547 AATKQ6ZMQ8 1374 aa12.25□□□□□ -0.45
CDC27-204ENST00000527547 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
CDC27-204ENST00000527547 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
CDC27-204ENST00000527547 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
CDC27-204ENST00000527547 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
CDC27-204ENST00000527547 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDC27-204ENST00000527547 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
CDC27-204ENST00000527547 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
CDC27-204ENST00000527547 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
CDC27-204ENST00000527547 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
CDC27-204ENST00000527547 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
CDC27-204ENST00000527547 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
CDC27-204ENST00000527547 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
CDC27-204ENST00000527547 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
CDC27-204ENST00000527547 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
CDC27-204ENST00000527547 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
CDC27-204ENST00000527547 PXDNQ92626 1479 aa12.21□□□□□ -0.46
CDC27-204ENST00000527547 APAF1O14727 1248 aa12.21□□□□□ -0.46
CDC27-204ENST00000527547 CABLES1Q8TDN4 633 aa12.21□□□□□ -0.46
CDC27-204ENST00000527547 NUDCQ9Y266 331 aa12.21□□□□□ -0.46
CDC27-204ENST00000527547 IL13P35225 146 aa12.2□□□□□ -0.46
CDC27-204ENST00000527547 AMPHP49418 695 aa12.2□□□□□ -0.46
CDC27-204ENST00000527547 INSRP06213 1382 aa12.2□□□□□ -0.46
CDC27-204ENST00000527547 HMOX1P09601 288 aa12.2□□□□□ -0.46
CDC27-204ENST00000527547 USP54Q70EL1 1684 aa12.19□□□□□ -0.46
CDC27-204ENST00000527547 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
CDC27-204ENST00000527547 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
CDC27-204ENST00000527547 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CDC27-204ENST00000527547 GCP02774 474 aa12.19□□□□□ -0.46
CDC27-204ENST00000527547 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
CDC27-204ENST00000527547 NFAT5O94916 1531 aa12.18□□□□□ -0.46
CDC27-204ENST00000527547 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
CDC27-204ENST00000527547 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
CDC27-204ENST00000527547 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
CDC27-204ENST00000527547 HOXC9P31274 260 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
CDC27-204ENST00000527547 FLT4P35916 1363 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
CDC27-204ENST00000527547 TCP11L2Q8N4U5 519 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
CDC27-204ENST00000527547 USP19O94966 1318 aa12.16□□□□□ -0.46
CDC27-204ENST00000527547 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
CDC27-204ENST00000527547 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
CDC27-204ENST00000527547 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
CDC27-204ENST00000527547 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms