RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 PRR36Q9H6K5 1346 aa30.46■■■□□ 2.47
PKP3-205ENST00000527442 THSD7AQ9UPZ6 1657 aa30.45■■■□□ 2.46
PKP3-205ENST00000527442 TNS1Q9HBL0 1735 aaKnown RBP30.44■■■□□ 2.46
PKP3-205ENST00000527442 CLSPNQ9HAW4 1339 aa30.44■■■□□ 2.46
PKP3-205ENST00000527442 BAG6P46379 1132 aa30.43■■■□□ 2.46
PKP3-205ENST00000527442 TRAK1Q9UPV9 953 aa30.43■■■□□ 2.46
PKP3-205ENST00000527442 MINK1Q8N4C8 1332 aaPredicted RBP30.43■■■□□ 2.46
PKP3-205ENST00000527442 GPRASP1Q5JY77 1395 aa30.42■■■□□ 2.46
PKP3-205ENST00000527442 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
PKP3-205ENST00000527442 CCER1Q8TC90 406 aaPredicted RBP30.42■■■□□ 2.46
PKP3-205ENST00000527442 EIF3AQ14152 1382 aaKnown RBP30.41■■■□□ 2.46
PKP3-205ENST00000527442 ITSN1Q15811 1721 aa30.4■■■□□ 2.46
PKP3-205ENST00000527442 ARHGEF28Q8N1W1 1705 aaKnown RBP30.39■■■□□ 2.45
PKP3-205ENST00000527442 PHRF1Q9P1Y6 1649 aaKnown RBP30.37■■■□□ 2.45
PKP3-205ENST00000527442 FAM182BQ5T319 152 aa30.37■■■□□ 2.45
PKP3-205ENST00000527442 SPATA31A5Q5VU36 1347 aa30.37■■■□□ 2.45
PKP3-205ENST00000527442 SPATA31A7Q8IWB4 1347 aa30.37■■■□□ 2.45
PKP3-205ENST00000527442 WASLO00401 505 aaPredicted RBP30.34■■■□□ 2.45
PKP3-205ENST00000527442 EN1Q05925 392 aaPredicted RBP30.34■■■□□ 2.45
PKP3-205ENST00000527442 ATP7BP35670 1465 aa30.32■■■□□ 2.44
PKP3-205ENST00000527442 NGDNQ8NEJ9 315 aaKnown RBP30.31■■■□□ 2.44
PKP3-205ENST00000527442 PRDM11Q9NQV5 511 aa30.31■■■□□ 2.44
PKP3-205ENST00000527442 DISP2A7MBM2 1401 aa30.3■■■□□ 2.44
PKP3-205ENST00000527442 PAK3O75914 559 aaPredicted RBP30.3■■■□□ 2.44
PKP3-205ENST00000527442 KDM2AQ9Y2K7 1162 aa30.3■■■□□ 2.44
PKP3-205ENST00000527442 DCAF11Q8TEB1 546 aa30.28■■■□□ 2.44
PKP3-205ENST00000527442 TOPAZ1Q8N9V7 1692 aa30.27■■■□□ 2.44
PKP3-205ENST00000527442 KIAA0232Q92628 1395 aa30.27■■■□□ 2.44
PKP3-205ENST00000527442 SPATA31A1Q5TZJ5 1347 aa30.24■■■□□ 2.43
PKP3-205ENST00000527442 R3HDM1Q15032 1099 aaKnown RBP30.24■■■□□ 2.43
PKP3-205ENST00000527442 CHRNA2Q15822 529 aa30.23■■■□□ 2.43
PKP3-205ENST00000527442 NUDT16Q96DE0 195 aaKnown RBP30.21■■■□□ 2.43
PKP3-205ENST00000527442 NRKQ7Z2Y5 1582 aa30.2■■■□□ 2.43
PKP3-205ENST00000527442 EZH2Q15910 746 aaKnown RBP30.2■■■□□ 2.43
PKP3-205ENST00000527442 RREB1Q92766 1687 aa30.2■■■□□ 2.42
PKP3-205ENST00000527442 STRN4Q9NRL3 753 aa30.19■■■□□ 2.42
PKP3-205ENST00000527442 NUTM2GQ5VZR2 741 aa30.17■■■□□ 2.42
PKP3-205ENST00000527442 TRIM37O94972 964 aa30.16■■■□□ 2.42
PKP3-205ENST00000527442 ZC3H6P61129 1189 aaKnown RBP30.16■■■□□ 2.42
PKP3-205ENST00000527442 NUP188Q5SRE5 1749 aa30.16■■■□□ 2.42
PKP3-205ENST00000527442 LMO7Q8WWI1 1683 aa30.15■■■□□ 2.42
PKP3-205ENST00000527442 CAMKK2Q96RR4 588 aa30.15■■■□□ 2.42
PKP3-205ENST00000527442 POLR3AO14802 1390 aaPredicted RBP30.15■■■□□ 2.42
PKP3-205ENST00000527442 SSH2Q76I76 1423 aa30.14■■■□□ 2.42
PKP3-205ENST00000527442 FAM196AQ6ZSG2 479 aa30.14■■■□□ 2.42
PKP3-205ENST00000527442 STAC3Q96MF2 364 aa30.14■■■□□ 2.42
PKP3-205ENST00000527442 CAMTA1Q9Y6Y1 1673 aa30.13■■■□□ 2.41
PKP3-205ENST00000527442 CDK19Q9BWU1 502 aa30.12■■■□□ 2.41
PKP3-205ENST00000527442 USP35Q9P2H5 1018 aa30.12■■■□□ 2.41
PKP3-205ENST00000527442 KIAA1210Q9ULL0 1709 aa30.11■■■□□ 2.41
PKP3-205ENST00000527442 ACEP12821 1306 aa30.11■■■□□ 2.41
PKP3-205ENST00000527442 PARD3Q8TEW0 1356 aa30.09■■■□□ 2.41
PKP3-205ENST00000527442 APBA3O96018 575 aa30.08■■■□□ 2.41
PKP3-205ENST00000527442 SIN3AQ96ST3 1273 aa30.08■■■□□ 2.41
PKP3-205ENST00000527442 NBPF8Q3BBV2 869 aa30.07■■■□□ 2.4
PKP3-205ENST00000527442 BARGINQ6ZT62 677 aa30.07■■■□□ 2.4
PKP3-205ENST00000527442 PARP4Q9UKK3 1724 aaKnown RBP30.06■■■□□ 2.4
PKP3-205ENST00000527442 EVA1CP58658 441 aa30.05■■■□□ 2.4
PKP3-205ENST00000527442 LARP1Q6PKG0 1096 aaKnown RBP30.05■■■□□ 2.4
PKP3-205ENST00000527442 CPDO75976 1380 aa30.04■■■□□ 2.4
PKP3-205ENST00000527442 CCDC61Q9Y6R9 512 aa30.04■■■□□ 2.4
PKP3-205ENST00000527442 USP19O94966 1318 aa30.03■■■□□ 2.4
PKP3-205ENST00000527442 PLEKHG3A1L390 1219 aa30.03■■■□□ 2.4
PKP3-205ENST00000527442 ZEB1P37275 1124 aaPredicted RBP30.03■■■□□ 2.4
PKP3-205ENST00000527442 PDE3BQ13370 1112 aa30.03■■■□□ 2.4
PKP3-205ENST00000527442 ABTB2Q8N961 1025 aa30.02■■■□□ 2.4
PKP3-205ENST00000527442 TCP11L2Q8N4U5 519 aa30■■■□□ 2.39
PKP3-205ENST00000527442 COL5A2P05997 1499 aaPredicted RBP29.99■■■□□ 2.39
PKP3-205ENST00000527442 NEUROD1Q13562 356 aa29.98■■■□□ 2.39
PKP3-205ENST00000527442 TIMELESSQ9UNS1 1208 aa29.98■■■□□ 2.39
PKP3-205ENST00000527442 PEAK1Q9H792 1746 aa29.97■■■□□ 2.39
PKP3-205ENST00000527442 PPIP5K1Q6PFW1 1433 aa29.96■■■□□ 2.39
PKP3-205ENST00000527442 QRICH2Q9H0J4 1663 aa29.96■■■□□ 2.39
PKP3-205ENST00000527442 TONSLQ96HA7 1378 aa29.95■■■□□ 2.39
PKP3-205ENST00000527442 SBF2Q86WG5 1849 aa29.95■■■□□ 2.39
PKP3-205ENST00000527442 LRRC37A3O60309 1634 aa29.95■■■□□ 2.38
PKP3-205ENST00000527442 RGPD3A6NKT7 1758 aaPredicted RBP29.93■■■□□ 2.38
PKP3-205ENST00000527442 RGPD4Q7Z3J3 1758 aa29.93■■■□□ 2.38
PKP3-205ENST00000527442 GCP02774 474 aa29.93■■■□□ 2.38
PKP3-205ENST00000527442 NBPF1Q3BBV0 1214 aa29.93■■■□□ 2.38
PKP3-205ENST00000527442 THRAP3Q9Y2W1 955 aaKnown RBP29.93■■■□□ 2.38
PKP3-205ENST00000527442 WNK3Q9BYP7 1800 aa29.93■■■□□ 2.38
PKP3-205ENST00000527442 NLRP13Q86W25 1043 aa29.92■■■□□ 2.38
PKP3-205ENST00000527442 SRPK2P78362 688 aaKnown RBP29.91■■■□□ 2.38
PKP3-205ENST00000527442 NBPF14Q5TI25 921 aa29.91■■■□□ 2.38
PKP3-205ENST00000527442 SLIT3O75094 1523 aa29.91■■■□□ 2.38
PKP3-205ENST00000527442 CRB1P82279 1406 aa29.9■■■□□ 2.38
PKP3-205ENST00000527442 COL18A1P39060 1754 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 CABP2Q9NPB3 220 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 PIK3C2AO00443 1686 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 OVOS2A0A0G2JMS6 1433 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 OVOS2A0A0J9YW53 1432 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 OVOS2Q6IE36 1432 aa29.88■■■□□ 2.37
PKP3-205ENST00000527442 CENPJQ9HC77 1338 aaPredicted RBP29.87■■■□□ 2.37
PKP3-205ENST00000527442 USP6P35125 1406 aa29.87■■■□□ 2.37
PKP3-205ENST00000527442 BRD4O60885 1362 aaPredicted RBP29.86■■■□□ 2.37
PKP3-205ENST00000527442 ZBTB7CA1YPR0 619 aa29.85■■■□□ 2.37
PKP3-205ENST00000527442 AKAP12Q02952 1782 aa29.83■■■□□ 2.37
PKP3-205ENST00000527442 AATKQ6ZMQ8 1374 aa29.83■■■□□ 2.37
PKP3-205ENST00000527442 CASZ1Q86V15 1759 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms