RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
CCDC90B-203ENST00000525503 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
CCDC90B-203ENST00000525503 COG6Q9Y2V7 657 aa21.27■■□□□ 1
CCDC90B-203ENST00000525503 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
CCDC90B-203ENST00000525503 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
CCDC90B-203ENST00000525503 TMPOP42166 694 aaKnown RBP21.25■□□□□ 0.99
CCDC90B-203ENST00000525503 IL16Q14005 1332 aa21.25■□□□□ 0.99
CCDC90B-203ENST00000525503 KIF20BQ96Q89 1820 aa21.25■□□□□ 0.99
CCDC90B-203ENST00000525503 HDGFP51858 240 aaKnown RBP21.25■□□□□ 0.99
CCDC90B-203ENST00000525503 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
CCDC90B-203ENST00000525503 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
CCDC90B-203ENST00000525503 IGHDP01880 384 aa21.23■□□□□ 0.99
CCDC90B-203ENST00000525503 PMFBP1Q8TBY8 1022 aa21.23■□□□□ 0.99
CCDC90B-203ENST00000525503 RGS3P49796 1198 aa21.21■□□□□ 0.99
CCDC90B-203ENST00000525503 C8orf34Q49A92 452 aa21.21■□□□□ 0.99
CCDC90B-203ENST00000525503 SIRT1Q96EB6 747 aa21.21■□□□□ 0.99
CCDC90B-203ENST00000525503 TRIM35Q9UPQ4 493 aa21.21■□□□□ 0.99
CCDC90B-203ENST00000525503 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
CCDC90B-203ENST00000525503 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-203ENST00000525503 NRXN3Q9Y4C0 1643 aa21.19■□□□□ 0.98
CCDC90B-203ENST00000525503 FCHSD2O94868 740 aa21.19■□□□□ 0.98
CCDC90B-203ENST00000525503 FAM135BQ49AJ0 1406 aa21.19■□□□□ 0.98
CCDC90B-203ENST00000525503 EDC4Q6P2E9 1401 aaKnown RBP21.19■□□□□ 0.98
CCDC90B-203ENST00000525503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.18■□□□□ 0.983e-6■■■■□ 25.7
CCDC90B-203ENST00000525503 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 BCL2L13Q9BXK5 485 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 CPSF1Q10570 1443 aaKnown RBP21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 METP08581 1390 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 RLBP1P12271 317 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 RIPK4P57078 832 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 NBR1Q14596 966 aa21.17■□□□□ 0.98
CCDC90B-203ENST00000525503 TNRQ92752 1358 aa21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 TECPR2O15040 1411 aa21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 NEFMP07197 916 aa21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 EXOSC9Q06265 439 aaKnown RBP21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 TSR2Q969E8 191 aaKnown RBP21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
CCDC90B-203ENST00000525503 KNDC1Q76NI1 1749 aa21.15■□□□□ 0.98
CCDC90B-203ENST00000525503 KIF13AQ9H1H9 1805 aa21.15■□□□□ 0.98
CCDC90B-203ENST00000525503 MVPQ14764 893 aaKnown RBP21.14■□□□□ 0.97
CCDC90B-203ENST00000525503 FTSJ3Q8IY81 847 aaKnown RBP21.14■□□□□ 0.97
CCDC90B-203ENST00000525503 DZIP1LQ8IYY4 767 aaKnown RBP21.14■□□□□ 0.97
CCDC90B-203ENST00000525503 SMC4Q9NTJ3 1288 aa21.14■□□□□ 0.97
CCDC90B-203ENST00000525503 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
CCDC90B-203ENST00000525503 TXNDC2Q86VQ3 553 aa21.13■□□□□ 0.97
CCDC90B-203ENST00000525503 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
CCDC90B-203ENST00000525503 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
CCDC90B-203ENST00000525503 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
CCDC90B-203ENST00000525503 TNNQ9UQP3 1299 aa21.12■□□□□ 0.97
CCDC90B-203ENST00000525503 CPS1P31327 1500 aa21.12■□□□□ 0.97
CCDC90B-203ENST00000525503 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
CCDC90B-203ENST00000525503 LRRC7Q96NW7 1537 aa21.11■□□□□ 0.97
CCDC90B-203ENST00000525503 AATKQ6ZMQ8 1374 aa21.11■□□□□ 0.97
CCDC90B-203ENST00000525503 TMEM2Q9UHN6 1383 aa21.11■□□□□ 0.97
CCDC90B-203ENST00000525503 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
CCDC90B-203ENST00000525503 CCDC61Q9Y6R9 512 aa21.1■□□□□ 0.97
CCDC90B-203ENST00000525503 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
CCDC90B-203ENST00000525503 DAXXQ9UER7 740 aaPredicted RBP21.09■□□□□ 0.97
CCDC90B-203ENST00000525503 CDK12Q9NYV4 1490 aaPredicted RBP21.09■□□□□ 0.97
CCDC90B-203ENST00000525503 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.97
CCDC90B-203ENST00000525503 SSH1Q8WYL5 1049 aa21.08■□□□□ 0.97
CCDC90B-203ENST00000525503 COG3Q96JB2 828 aa21.08■□□□□ 0.96
CCDC90B-203ENST00000525503 ZNF692Q9BU19 519 aaPredicted RBP21.08■□□□□ 0.96
CCDC90B-203ENST00000525503 NFE2L2Q16236 605 aa21.07■□□□□ 0.96
CCDC90B-203ENST00000525503 NME9Q86XW9 330 aa21.07■□□□□ 0.96
CCDC90B-203ENST00000525503 KIF16BQ96L93 1317 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 IPO8O15397 1037 aaKnown RBP21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 ALDH1L2Q3SY69 923 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 ATF7IPQ6VMQ6 1270 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 DDX19BQ9UMR2 479 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 UBR1Q8IWV7 1749 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
CCDC90B-203ENST00000525503 TRIM27P14373 513 aa21.05■□□□□ 0.96
CCDC90B-203ENST00000525503 IL13P35225 146 aa21.05■□□□□ 0.96
CCDC90B-203ENST00000525503 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
CCDC90B-203ENST00000525503 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
CCDC90B-203ENST00000525503 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
CCDC90B-203ENST00000525503 FBLN1P23142 703 aa21.04■□□□□ 0.96
CCDC90B-203ENST00000525503 DEKP35659 375 aaKnown RBP21.03■□□□□ 0.96
CCDC90B-203ENST00000525503 NOB1Q9ULX3 412 aaKnown RBP21.03■□□□□ 0.96
CCDC90B-203ENST00000525503 PDZRN3Q9UPQ7 1066 aa21.03■□□□□ 0.96
CCDC90B-203ENST00000525503 PLEKHG1Q9ULL1 1385 aa21.02■□□□□ 0.96
CCDC90B-203ENST00000525503 LAS1LQ9Y4W2 734 aaKnown RBP21.02■□□□□ 0.96
CCDC90B-203ENST00000525503 MAP2P11137 1827 aaKnown RBP21.02■□□□□ 0.96
CCDC90B-203ENST00000525503 VIRMAQ69YN4 1812 aaKnown RBP21.02■□□□□ 0.96
CCDC90B-203ENST00000525503 ROBO2Q9HCK4 1378 aa21.01■□□□□ 0.95
CCDC90B-203ENST00000525503 AKAP12Q02952 1782 aa21.01■□□□□ 0.95
CCDC90B-203ENST00000525503 HMOX1P09601 288 aa21.01■□□□□ 0.95
CCDC90B-203ENST00000525503 ITPRIPQ8IWB1 547 aa21.01■□□□□ 0.95
CCDC90B-203ENST00000525503 ADAMTS13Q76LX8 1427 aa21.01■□□□□ 0.95
CCDC90B-203ENST00000525503 BRPF1P55201 1214 aaPredicted RBP21■□□□□ 0.95
CCDC90B-203ENST00000525503 LMOD3Q0VAK6 560 aa21■□□□□ 0.95
CCDC90B-203ENST00000525503 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
CCDC90B-203ENST00000525503 PHACTR3Q96KR7 559 aa21■□□□□ 0.95
CCDC90B-203ENST00000525503 ITSN1Q15811 1721 aa21■□□□□ 0.95
CCDC90B-203ENST00000525503 ZRANB1Q9UGI0 708 aa21■□□□□ 0.95
CCDC90B-203ENST00000525503 C3P01024 1663 aa20.99■□□□□ 0.95
CCDC90B-203ENST00000525503 GNAI1P63096 354 aa20.99■□□□□ 0.95
CCDC90B-203ENST00000525503 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms